Merge branch 'fix/centralizedonlinux' into 'development'

Fix/centralizedonlinux

See merge request !69

+PlotID/Publish.m

@@ -46,6 +46,11 @@ if isstring(scriptPath)
    scriptPath = char(scriptPath);
 end
 
+% ensure ParentFolder has no trailing fileseperator
+if contains(options.ParentFolder(end),filesep)
+    options.ParentFolder(end)='';
+end
+
 %catch multiple figures in fig
 if numel(figure) > 1
     figure = figure(1);

+PlotID/createLinkedHDF5.m

@@ -12,11 +12,17 @@ end
 
 [~,filename,ext] = fileparts(SourceFile);
 
+% create GroupName to avoid internal path issues on linux/unix systems
+GroupName = split(SourceFile,filesep);
+% Using windows fileseperator for the object name
+GroupName = join(GroupName,'\');
+GroupName = GroupName{:};
+
 try
     fid = H5F.create(fullfile(TargetPath,[filename,ext]));
     %create External Link to Sourcefile in the Group linkToExternal
-    H5L.create_external(['..',filesep,SourceFile],'/',fid, SourceFile ,plist_id,plist_id);
-    %H5L.create_external(['..,filesep,'data',filesep,SourceFile],'/',fid, SourceFile ,plist_id,plist_id); %original
+    H5L.create_external(['..',SourceFile],'/',fid, GroupName ,plist_id,plist_id);
+    %H5L.create_external(['..,filesep,'data',SourceFile],'/',fid, GroupName ,plist_id,plist_id); %original
     H5F.close(fid);
     disp([fullfile(TargetPath,[filename,ext]),' created']);
     status = 1;

Examples/PlotID_centralized.m

@@ -25,9 +25,9 @@ plot(x.^2,y,'-r');
 PlotID.Publish(datapath,scriptPath, fig2, 'Method','centralized')
 
 %% Note:
-% If you rerun this script PlotId will tell you that a identical named (but
-% not binary idetical) file exists in the data folder. This is intended,
-% due protect the user from overwritting non (binary) identical files. The
-% reason for this is that two hdf files with the same data are not idetical
+% If you rerun this script PlotId will tell you that an identically named (but
+% not binary identical) file exists in the data folder. This is intended
+% to protect the user from overwritting non (binary) identical files. The
+% reason for this is that two hdf files with the same data are not identical
 % when recreated (see line 11). Usually you would use an existing file
 % without changing it.
\ No newline at end of file