update example-profile

.gitlab-ci.yml

@@ -3,10 +3,6 @@ image: docker:19.03.1
 stages:
 - build
 
-variables:
-  GIT_SUBMODULE_STRATEGY: recursive
-  DOCKER_TLS_CERTDIR: "/certs"
-
 before_script:
 - docker login -u ${CI_REGISTRY_USER} -p ${CI_REGISTRY_PASSWORD} ${CI_REGISTRY}
 

Dockerfile

-# Specify parent image
-ARG BASE_IMAGE=registry.git-ce.rwth-aachen.de/jupyter/singleuser/python:latest
+# Specify parent image. Please select a fixed tag here.
+ARG BASE_IMAGE=registry.git.rwth-aachen.de/jupyter/profiles/rwth-courses:2020-ss.1
 FROM ${BASE_IMAGE}
 
 # Install packages via requirements.txt
 ADD /tmp/requirement.txt .
 RUN pip3 install -r /tmp/requirements.txt
 
-# Update conda base environment to match specifications in environment.yml
+# .. Or update conda base environment to match specifications in environment.yml
 ADD environment.yml /tmp/environment.yml
-USER root
 RUN sed -i "s|name\: jupyter-example-profile|name\: base|g" /tmp/environment.yml # we need to replace the name of the environment with base such that we can update the base environment here
-USER $NB_USER
 
 # All packages specified in environment.yml are installed in the base environment
 RUN conda env update -f /tmp/environment.yml && \
     conda clean -a -f -y
 
-ENV JUPYTER_ENABLE_LAB=yes

README.md

@@ -6,7 +6,7 @@ This repository contains an exemplary Jupyter profile which works with the RWTH
 
 * `Quickstart.ipynb` which is an exemplary Jupyter notebook file.
 * `environment.yml` which specifies the required Python packages needed to run `Quickstart.ipynb`. This file is used by Anaconda or `conda`.
-* `Dockerfile` which defines the linux environment. In the end, the packages in `environment.yml` are installed and a `postBuild.sh` script is executed afterwards.
+* `Dockerfile` which defines the linux environment. In the end, the packages in `environment.yml` are installed.
 * `.gitlab-ci.yml` which specifies the necessary Docker build commands (which are executed every time `Dockerfile` changes in Git).
 
 ## Installation

environment.yml

@@ -2,9 +2,4 @@ name: jupyter-example-profile
 channels:
   - conda-forge
 dependencies:
-  - numpy=1.17.3
-  - scipy=1.4.1
-  - matplotlib=3.1.2
-  - jupyterlab=1.2.4
-  - nodejs=13.6.0
-  - ipympl=0.4.1 # Enables interactive plots 
+  - bokeh==2.0.1

postBuild.sh

-#!/bin/sh
-
-jupyter labextension install @jupyter-widgets/jupyterlab-manager@1.1 jupyter-matplotlib@0.5.0
\ No newline at end of file

rwth_colors_matplotlib.py

-import matplotlib.colors as mcolors
-
-# RWTH Colors
-rwth_colors = {
-  'blue':    '#00549F',
-  'blue-75': '#407FB7',
-  'blue-50': '#8EBAE5',
-  'blue-25': '#C7DDF2',
-  'blue-10': '#E8F1FA',
-  'black':    '#000000',
-  'black-75': '#646567',
-  'black-50': '#9C9E9F',
-  'black-25': '#CFD1D2',
-  'black-10': '#ECEDED',
-  'magenta':    '#E30066',
-  'magenta-75': '#E96088',
-  'magenta-50': '#F19EB1',
-  'magenta-25': '#F9D2DA',
-  'magenta-10': '#FDEEF0',
-  'yellow':    '#FFED00',
-  'yellow-75': '#FFF055',
-  'yellow-50': '#FFF59B',
-  'yellow-25': '#FFFAD1',
-  'yellow-10': '#FFFDEE',
-  'petrol':    '#006165',
-  'petrol-75': '#2D7F83',
-  'petrol-50': '#7DA4A7',
-  'petrol-25': '#BFD0D1',
-  'petrol-10': '#E6ECEC',
-  'turquoise':    '#0098A1',
-  'turquoise-75': '#00B1B7',
-  'turquoise-50': '#89CCCF',
-  'turquoise-25': '#CAE7E7',
-  'turquoise-10': '#EBF6F6',
-  'green':    '#57AB27',
-  'green-75': '#8DC060',
-  'green-50': '#B8D698',
-  'green-25': '#DDEBCE',
-  'green-10': '#F2F7EC',
-  'maigrun':    '#BDCD00',
-  'maigrun-75': '#D0D95C',
-  'maigrun-50': '#E0E69A',
-  'maigrun-25': '#F0F3D0',
-  'maigrun-10': '#F9FAED',
-  'orange':    '#F6A800',
-  'orange-75': '#FABE50',
-  'orange-50': '#FDD48F',
-  'orange-25': '#FEEAC9',
-  'orange-10': '#FFF7EA',
-  'red':    '#CC071E',
-  'red-75': '#D85C41',
-  'red-50': '#E69679',
-  'red-25': '#F3CDBB',
-  'red-10': '#FAEBE3',
-  'bordeaux':    '#A11035',
-  'bordeaux-75': '#B65256',
-  'bordeaux-50': '#CD8B87',
-  'bordeaux-25': '#E5C5C0',
-  'bordeaux-10': '#F5E8E5',
-  'violet':    '#612158',
-  'violet-75': '#834E75',
-  'violet-50': '#A8859E',
-  'violet-25': '#D2C0CD',
-  'violet-10': '#EDE5EA',
-  'purple':    '#7A6FAC',
-  'purple-75': '#9B91C1',
-  'purple-50': '#BCB5D7',
-  'purple-25': '#DEDAEB',
-  'purple-10': '#F2F0F7',
-}
-
-# Append prefix
-rwth_colors = {'rwth:' + name: value for name, value in rwth_colors.items()}
-
-# Propagate rwth_colors to default matplotlib colors
-mcolors.get_named_colors_mapping().update(rwth_colors)