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Commit 0ca46b51 authored by Nicole Parks's avatar Nicole Parks Committed by Petar Hristov
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SRFM MAYA

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...@@ -10,7 +10,7 @@ ...@@ -10,7 +10,7 @@
@prefix unit: <http://qudt.org/vocab/unit/> . @prefix unit: <http://qudt.org/vocab/unit/> .
@prefix coscineSRFM: <https://purl.org/coscine/ap/srfm/haenselGretel#> . @prefix coscineSRFM: <https://purl.org/coscine/ap/srfm/haenselGretel#> .
@prefix coscineSRFMSW: <https://purl.org/coscine/ap/srfm/schneewittchen#> . @prefix coscineSRFMSW: <https://purl.org/coscine/ap/srfm/schneewittchen#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix dcterms:<http://purl.org/dc/terms/> . @prefix dcterms:<http://purl.org/dc/terms/> .
@prefix afr:<http://purl.allotrope.org/ontologies/result#> . @prefix afr:<http://purl.allotrope.org/ontologies/result#> .
@prefix csmd:<http://www.purl.org/net/CSMD/4.0#sample_name> . @prefix csmd:<http://www.purl.org/net/CSMD/4.0#sample_name> .
...@@ -22,6 +22,8 @@ ...@@ -22,6 +22,8 @@
@prefix bao:<http://www.bioassayontology.org/bao#> . @prefix bao:<http://www.bioassayontology.org/bao#> .
@prefix afo:<http://purl.allotrope.org/ontologies/result#AFR_0001625> . @prefix afo:<http://purl.allotrope.org/ontologies/result#AFR_0001625> .
@prefix dbo:<http://dbpedia.org/ontology/> . @prefix dbo:<http://dbpedia.org/ontology/> .
@prefix coscinedropShapeAnalysis: <https://purl.org/coscine/ap/sfb985/dropShapeAnalysis#> .
<https://purl.org/coscine/ap/srfm/maya/> <https://purl.org/coscine/ap/srfm/maya/>
dcterms:license <http://spdx.org/licenses/MIT> ; dcterms:license <http://spdx.org/licenses/MIT> ;
...@@ -39,7 +41,7 @@ sh:property [ ...@@ -39,7 +41,7 @@ sh:property [
sh:property coscineSRFM:creator ; sh:property coscineSRFM:creator ;
sh:property coscineSRFM:student ; sh:property coscineSRFM:student ;
sh:property coscineSRFM:timeOfMeasurement ; sh:property coscineSRFM:dateOfMeasurement ;
sh:property coscineSRFM:measurementName ; sh:property coscineSRFM:measurementName ;
sh:property coscineSRFM:sampleName ; sh:property coscineSRFM:sampleName ;
sh:property coscineSRFM:samplePID ; sh:property coscineSRFM:samplePID ;
...@@ -77,7 +79,12 @@ sh:property [ ...@@ -77,7 +79,12 @@ sh:property [
sh:property coscineSRFMMaya:intervalIlluminationSample ; sh:property coscineSRFMMaya:intervalIlluminationSample ;
sh:property coscineSRFMSW:zStackOptions ; sh:property coscineSRFMSW:zStackOptions ;
sh:property coscineSRFMSW:numFrames ; sh:property coscineSRFMSW:numFrames ;
sh:property coscineSRFMSW:sizeFov . sh:property coscineSRFMSW:sizeFov ;
sh:property coscinedropShapeAnalysis:comment ;
sh:property coscinedropShapeAnalysis:elabID .
coscineSRFM:creator coscineSRFM:creator
sh:path dcterms:creator ; sh:path dcterms:creator ;
...@@ -96,13 +103,13 @@ coscineSRFM:student ...@@ -96,13 +103,13 @@ coscineSRFM:student
sh:name "Student"@en, "Student"@de. sh:name "Student"@en, "Student"@de.
coscineSRFM:timeOfMeasurement coscineSRFM:dateOfMeasurement
sh:path afr:AFR_0000952e ; sh:path afr:AFR_0000952e ;
sh:order 2 ; sh:order 2 ;
sh:description "date and time data was produced"@en ; sh:description "date data was produced"@en ;
sh:datatype xsd:dateTime ; sh:datatype xsd:date ;
sh:minCount 1 ; sh:minCount 1 ;
sh:name "Time of Measurement"@en, "Zeitpunkt der Messung"@de. sh:name "Measurement Date"@en, "Datum der Messung"@de.
coscineSRFM:measurementName coscineSRFM:measurementName
...@@ -226,7 +233,7 @@ coscineSRFM:laserIntensity ...@@ -226,7 +233,7 @@ coscineSRFM:laserIntensity
sh:description "raw maximum laser intensity measured at objective lens (mW)"@en ; sh:description "raw maximum laser intensity measured at objective lens (mW)"@en ;
sh:datatype xsd:decimal ; sh:datatype xsd:decimal ;
qudt:Unit unit:MilliW ; qudt:Unit unit:MilliW ;
sh:name "Laser intensity [mW]"@en, "Laser-Intensität [mW]"@de. sh:name "Maximum Laser Intensity at Objective Lens [mW]"@en, "maximale Laser Intensität am Objektiv [mW]"@de.
coscineSRFM:laserSpotsize coscineSRFM:laserSpotsize
...@@ -280,7 +287,7 @@ coscineSRFM:excitationFilter ...@@ -280,7 +287,7 @@ coscineSRFM:excitationFilter
sh:order 22 ; sh:order 22 ;
sh:description "Which excitation filter was used"@en ; sh:description "Which excitation filter was used"@en ;
sh:datatype xsd:string ; sh:datatype xsd:string ;
sh:name "Excitation filter"@en, "Erregungsfilter"@de. sh:name "Excitation filter"@en, "Anregungsfilter"@de.
coscineSRFM:dichroicMirror coscineSRFM:dichroicMirror
...@@ -360,7 +367,7 @@ coscineSRFM:psfModificationMethod ...@@ -360,7 +367,7 @@ coscineSRFM:psfModificationMethod
sh:description "Which modification has been used"@en ; sh:description "Which modification has been used"@en ;
sh:class <http://purl.org/coscine/vocabularies/srfm/psfModificationMethodMaya> ; sh:class <http://purl.org/coscine/vocabularies/srfm/psfModificationMethodMaya> ;
sh:minCount 1 ; sh:minCount 1 ;
sh:name "PSF Modification method"@en, "PSF-Änderungsmethode"@de. sh:name "PSF Modification method"@en, "PSF-Modifizierung (Methode)"@de.
coscineSRFM:pixelSize coscineSRFM:pixelSize
...@@ -391,7 +398,7 @@ coscineSRFM:acquisitionMode ...@@ -391,7 +398,7 @@ coscineSRFM:acquisitionMode
coscineSRFMMaya:intervalExposureCam coscineSRFMMaya:intervalExposureCam
sh:path afo:delay ; sh:path srfm:delayCam ;
sh:order 35 ; sh:order 35 ;
sh:description "If intervals were set for acquisition, how long were they?"@en ; sh:description "If intervals were set for acquisition, how long were they?"@en ;
sh:datatype xsd:decimal ; sh:datatype xsd:decimal ;
...@@ -404,11 +411,11 @@ coscineSRFMMaya:illuminationMode ...@@ -404,11 +411,11 @@ coscineSRFMMaya:illuminationMode
sh:order 36 ; sh:order 36 ;
sh:description "Was the sample illuminated continuously or not?"@en ; sh:description "Was the sample illuminated continuously or not?"@en ;
sh:class <http://purl.org/coscine/vocabularies/srfm/illuminationMode> ; sh:class <http://purl.org/coscine/vocabularies/srfm/illuminationMode> ;
sh:name "Illumination mode"@en, "Beleuchtung Modus"@de. sh:name "Sample Illumination Mode"@en, "Proben-Belichtungs-Methode"@de.
coscineSRFMMaya:intervalIlluminationSample coscineSRFMMaya:intervalIlluminationSample
sh:path afo:delay ; sh:path srfm:delaySample ;
sh:order 37 ; sh:order 37 ;
sh:description "If intervals were set for illumination, how long were they?"@en ; sh:description "If intervals were set for illumination, how long were they?"@en ;
sh:datatype xsd:decimal ; sh:datatype xsd:decimal ;
...@@ -440,3 +447,18 @@ coscineSRFMSW:sizeFov ...@@ -440,3 +447,18 @@ coscineSRFMSW:sizeFov
sh:datatype xsd:string ; sh:datatype xsd:string ;
sh:name "Size FOV"@en, "Größe Field Of View"@de. sh:name "Size FOV"@en, "Größe Field Of View"@de.
coscinedropShapeAnalysis:comment
sh:path rdfs:comment ;
sh:order 41 ;
sh:datatype xsd:string ;
dash:singleLine false ;
sh:name "Additional notes"@en, "weitere Anmerkungen"@de
.
coscinedropShapeAnalysis:elabID
sh:path obo:IAO_0020000 ;
sh:order 42 ;
sh:datatype xsd:string ;
sh:name "Experiment ID (eLabFTW)"@en, "Experiment-ID (eLabFTW)"@de
.
...@@ -46,7 +46,7 @@ srfm:odFiltersUsed ...@@ -46,7 +46,7 @@ srfm:odFiltersUsed
. .
srfm:illuminationTime srfm:illuminationTime
rdfs:label "Illumination time"@en, "Illumnationszeit"@de ; rdfs:label "Illumination time"@en, "Illuminationszeit"@de ;
dcterms:description "Indicates whether the sample is illuminated throughout the whole measurement (continuous) or the shutter was closed."@en dcterms:description "Indicates whether the sample is illuminated throughout the whole measurement (continuous) or the shutter was closed."@en
. .
...@@ -271,3 +271,13 @@ srfm:intervalIlluminationCombined ...@@ -271,3 +271,13 @@ srfm:intervalIlluminationCombined
rdfs:label "Illumination Interval"@en, "Intervall-Beleuchtung"@de ; rdfs:label "Illumination Interval"@en, "Intervall-Beleuchtung"@de ;
dcterms:description "Describes whether the illumination of the sample and the detector is continuous in setups Interval illumination and Interval exposure cannot be separated."@en dcterms:description "Describes whether the illumination of the sample and the detector is continuous in setups Interval illumination and Interval exposure cannot be separated."@en
. .
srfm:delayCam
rdfs:label "Interval Exposure (Camera) [ms]"@en, "Intervall-Belichtung (Kamera) [ms]"@de ;
dcterms:description "Length of intervals set for sample illumination."@en
.
srfm:delaySample
rdfs:label "Interval Illumination (Sample) [ms]"@en, "Intervall-Beleuchtung (Probe) [ms]"@de ;
dcterms:description "Length of intervals set for sample illumination."@en
.
\ No newline at end of file
...@@ -39,15 +39,3 @@ ...@@ -39,15 +39,3 @@
rdfs:subClassOf <http://purl.org/coscine/vocabularies/srfm/maxLaserSetting> rdfs:subClassOf <http://purl.org/coscine/vocabularies/srfm/maxLaserSetting>
. .
<http://purl.org/coscine/vocabularies/srfm/maxLaserSetting#4> a <http://purl.org/coscine/vocabularies/srfm/maxLaserSetting#4>;
rdfs:label "500"@en , "500"@de ;
rdfs:subClassOf <http://purl.org/coscine/vocabularies/srfm/maxLaserSetting>
.
<http://purl.org/coscine/vocabularies/srfm/maxLaserSetting#5> a <http://purl.org/coscine/vocabularies/srfm/maxLaserSetting#5>;
rdfs:label "300"@en , "300"@de ;
rdfs:subClassOf <http://purl.org/coscine/vocabularies/srfm/maxLaserSetting>
.
\ No newline at end of file
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