From efe1c0ef00642787f648e74ed4b24fd25e45e2bf Mon Sep 17 00:00:00 2001
From: Regfare <>
Date: Thu, 4 Jan 2024 11:32:19 +0100
Subject: [PATCH] Remove unnecessary files in testing folder
---
test/4_Lulesh/CMakeCache.txt | 368 -
.../CMakeFiles/3.20.2/CMakeCXXCompiler.cmake | 91 -
.../3.20.2/CMakeDetermineCompilerABI_CXX.bin | Bin 18072 -> 0 bytes
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test/4_Lulesh/lulesh.ipcg | 1 -
test/4_Lulesh/lulesh.mini.cc | 2510 -
test/4_Lulesh/merged.ipcg | 41935 ----------------
55 files changed, 50249 deletions(-)
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delete mode 100755 test/4_Lulesh/CMakeFiles/3.20.2/CompilerIdCXX/a.out
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delete mode 100644 test/4_Lulesh/CMakeFiles/FindOpenMP/OpenMPCheckVersion.cpp
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delete mode 100644 test/4_Lulesh/CMakeFiles/Makefile2
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delete mode 100644 test/4_Lulesh/CMakeFiles/lulesh2.0.dir/lulesh-init.mini.cc.o
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delete mode 100644 test/4_Lulesh/CMakeFiles/lulesh2.0.dir/lulesh-viz.mini.cc.o
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delete mode 100644 test/4_Lulesh/lulesh-comm.ipcg
delete mode 100644 test/4_Lulesh/lulesh-comm.mini.cc
delete mode 100644 test/4_Lulesh/lulesh-init.ipcg
delete mode 100644 test/4_Lulesh/lulesh-init.mini.cc
delete mode 100644 test/4_Lulesh/lulesh-util.ipcg
delete mode 100644 test/4_Lulesh/lulesh-util.mini.cc
delete mode 100644 test/4_Lulesh/lulesh-viz.ipcg
delete mode 100644 test/4_Lulesh/lulesh-viz.mini.cc
delete mode 100644 test/4_Lulesh/lulesh.ipcg
delete mode 100644 test/4_Lulesh/lulesh.mini.cc
delete mode 100644 test/4_Lulesh/merged.ipcg
diff --git a/test/4_Lulesh/CMakeCache.txt b/test/4_Lulesh/CMakeCache.txt
deleted file mode 100644
index 3b8a89e..0000000
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+++ /dev/null
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-# define COMPILER_VERSION_MAJOR DEC(__COMO_VERSION__ / 100)
-# define COMPILER_VERSION_MINOR DEC(__COMO_VERSION__ % 100)
-
-#elif defined(__INTEL_COMPILER) || defined(__ICC)
-# define COMPILER_ID "Intel"
-# if defined(_MSC_VER)
-# define SIMULATE_ID "MSVC"
-# endif
-# if defined(__GNUC__)
-# define SIMULATE_ID "GNU"
-# endif
- /* __INTEL_COMPILER = VRP prior to 2021, and then VVVV for 2021 and later,
- except that a few beta releases use the old format with V=2021. */
-# if __INTEL_COMPILER < 2021 || __INTEL_COMPILER == 202110 || __INTEL_COMPILER == 202111
-# define COMPILER_VERSION_MAJOR DEC(__INTEL_COMPILER/100)
-# define COMPILER_VERSION_MINOR DEC(__INTEL_COMPILER/10 % 10)
-# if defined(__INTEL_COMPILER_UPDATE)
-# define COMPILER_VERSION_PATCH DEC(__INTEL_COMPILER_UPDATE)
-# else
-# define COMPILER_VERSION_PATCH DEC(__INTEL_COMPILER % 10)
-# endif
-# else
-# define COMPILER_VERSION_MAJOR DEC(__INTEL_COMPILER)
-# define COMPILER_VERSION_MINOR DEC(__INTEL_COMPILER_UPDATE)
- /* The third version component from --version is an update index,
- but no macro is provided for it. */
-# define COMPILER_VERSION_PATCH DEC(0)
-# endif
-# if defined(__INTEL_COMPILER_BUILD_DATE)
- /* __INTEL_COMPILER_BUILD_DATE = YYYYMMDD */
-# define COMPILER_VERSION_TWEAK DEC(__INTEL_COMPILER_BUILD_DATE)
-# endif
-# if defined(_MSC_VER)
- /* _MSC_VER = VVRR */
-# define SIMULATE_VERSION_MAJOR DEC(_MSC_VER / 100)
-# define SIMULATE_VERSION_MINOR DEC(_MSC_VER % 100)
-# endif
-# if defined(__GNUC__)
-# define SIMULATE_VERSION_MAJOR DEC(__GNUC__)
-# elif defined(__GNUG__)
-# define SIMULATE_VERSION_MAJOR DEC(__GNUG__)
-# endif
-# if defined(__GNUC_MINOR__)
-# define SIMULATE_VERSION_MINOR DEC(__GNUC_MINOR__)
-# endif
-# if defined(__GNUC_PATCHLEVEL__)
-# define SIMULATE_VERSION_PATCH DEC(__GNUC_PATCHLEVEL__)
-# endif
-
-#elif (defined(__clang__) && defined(__INTEL_CLANG_COMPILER)) || defined(__INTEL_LLVM_COMPILER)
-# define COMPILER_ID "IntelLLVM"
-#if defined(_MSC_VER)
-# define SIMULATE_ID "MSVC"
-#endif
-#if defined(__GNUC__)
-# define SIMULATE_ID "GNU"
-#endif
-/* __INTEL_LLVM_COMPILER = VVVVRP prior to 2021.2.0, VVVVRRPP for 2021.2.0 and
- * later. Look for 6 digit vs. 8 digit version number to decide encoding.
- * VVVV is no smaller than the current year when a versio is released.
- */
-#if __INTEL_LLVM_COMPILER < 1000000L
-# define COMPILER_VERSION_MAJOR DEC(__INTEL_LLVM_COMPILER/100)
-# define COMPILER_VERSION_MINOR DEC(__INTEL_LLVM_COMPILER/10 % 10)
-# define COMPILER_VERSION_PATCH DEC(__INTEL_LLVM_COMPILER % 10)
-#else
-# define COMPILER_VERSION_MAJOR DEC(__INTEL_LLVM_COMPILER/10000)
-# define COMPILER_VERSION_MINOR DEC(__INTEL_LLVM_COMPILER/100 % 100)
-# define COMPILER_VERSION_PATCH DEC(__INTEL_LLVM_COMPILER % 100)
-#endif
-#if defined(_MSC_VER)
- /* _MSC_VER = VVRR */
-# define SIMULATE_VERSION_MAJOR DEC(_MSC_VER / 100)
-# define SIMULATE_VERSION_MINOR DEC(_MSC_VER % 100)
-#endif
-#if defined(__GNUC__)
-# define SIMULATE_VERSION_MAJOR DEC(__GNUC__)
-#elif defined(__GNUG__)
-# define SIMULATE_VERSION_MAJOR DEC(__GNUG__)
-#endif
-#if defined(__GNUC_MINOR__)
-# define SIMULATE_VERSION_MINOR DEC(__GNUC_MINOR__)
-#endif
-#if defined(__GNUC_PATCHLEVEL__)
-# define SIMULATE_VERSION_PATCH DEC(__GNUC_PATCHLEVEL__)
-#endif
-
-#elif defined(__PATHCC__)
-# define COMPILER_ID "PathScale"
-# define COMPILER_VERSION_MAJOR DEC(__PATHCC__)
-# define COMPILER_VERSION_MINOR DEC(__PATHCC_MINOR__)
-# if defined(__PATHCC_PATCHLEVEL__)
-# define COMPILER_VERSION_PATCH DEC(__PATHCC_PATCHLEVEL__)
-# endif
-
-#elif defined(__BORLANDC__) && defined(__CODEGEARC_VERSION__)
-# define COMPILER_ID "Embarcadero"
-# define COMPILER_VERSION_MAJOR HEX(__CODEGEARC_VERSION__>>24 & 0x00FF)
-# define COMPILER_VERSION_MINOR HEX(__CODEGEARC_VERSION__>>16 & 0x00FF)
-# define COMPILER_VERSION_PATCH DEC(__CODEGEARC_VERSION__ & 0xFFFF)
-
-#elif defined(__BORLANDC__)
-# define COMPILER_ID "Borland"
- /* __BORLANDC__ = 0xVRR */
-# define COMPILER_VERSION_MAJOR HEX(__BORLANDC__>>8)
-# define COMPILER_VERSION_MINOR HEX(__BORLANDC__ & 0xFF)
-
-#elif defined(__WATCOMC__) && __WATCOMC__ < 1200
-# define COMPILER_ID "Watcom"
- /* __WATCOMC__ = VVRR */
-# define COMPILER_VERSION_MAJOR DEC(__WATCOMC__ / 100)
-# define COMPILER_VERSION_MINOR DEC((__WATCOMC__ / 10) % 10)
-# if (__WATCOMC__ % 10) > 0
-# define COMPILER_VERSION_PATCH DEC(__WATCOMC__ % 10)
-# endif
-
-#elif defined(__WATCOMC__)
-# define COMPILER_ID "OpenWatcom"
- /* __WATCOMC__ = VVRP + 1100 */
-# define COMPILER_VERSION_MAJOR DEC((__WATCOMC__ - 1100) / 100)
-# define COMPILER_VERSION_MINOR DEC((__WATCOMC__ / 10) % 10)
-# if (__WATCOMC__ % 10) > 0
-# define COMPILER_VERSION_PATCH DEC(__WATCOMC__ % 10)
-# endif
-
-#elif defined(__SUNPRO_CC)
-# define COMPILER_ID "SunPro"
-# if __SUNPRO_CC >= 0x5100
- /* __SUNPRO_CC = 0xVRRP */
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-# define COMPILER_VERSION_MINOR HEX(__SUNPRO_CC>>4 & 0xFF)
-# define COMPILER_VERSION_PATCH HEX(__SUNPRO_CC & 0xF)
-# else
- /* __SUNPRO_CC = 0xVRP */
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-# define COMPILER_VERSION_MINOR HEX(__SUNPRO_CC>>4 & 0xF)
-# define COMPILER_VERSION_PATCH HEX(__SUNPRO_CC & 0xF)
-# endif
-
-#elif defined(__HP_aCC)
-# define COMPILER_ID "HP"
- /* __HP_aCC = VVRRPP */
-# define COMPILER_VERSION_MAJOR DEC(__HP_aCC/10000)
-# define COMPILER_VERSION_MINOR DEC(__HP_aCC/100 % 100)
-# define COMPILER_VERSION_PATCH DEC(__HP_aCC % 100)
-
-#elif defined(__DECCXX)
-# define COMPILER_ID "Compaq"
- /* __DECCXX_VER = VVRRTPPPP */
-# define COMPILER_VERSION_MAJOR DEC(__DECCXX_VER/10000000)
-# define COMPILER_VERSION_MINOR DEC(__DECCXX_VER/100000 % 100)
-# define COMPILER_VERSION_PATCH DEC(__DECCXX_VER % 10000)
-
-#elif defined(__IBMCPP__) && defined(__COMPILER_VER__)
-# define COMPILER_ID "zOS"
- /* __IBMCPP__ = VRP */
-# define COMPILER_VERSION_MAJOR DEC(__IBMCPP__/100)
-# define COMPILER_VERSION_MINOR DEC(__IBMCPP__/10 % 10)
-# define COMPILER_VERSION_PATCH DEC(__IBMCPP__ % 10)
-
-#elif defined(__ibmxl__) && defined(__clang__)
-# define COMPILER_ID "XLClang"
-# define COMPILER_VERSION_MAJOR DEC(__ibmxl_version__)
-# define COMPILER_VERSION_MINOR DEC(__ibmxl_release__)
-# define COMPILER_VERSION_PATCH DEC(__ibmxl_modification__)
-# define COMPILER_VERSION_TWEAK DEC(__ibmxl_ptf_fix_level__)
-
-
-#elif defined(__IBMCPP__) && !defined(__COMPILER_VER__) && __IBMCPP__ >= 800
-# define COMPILER_ID "XL"
- /* __IBMCPP__ = VRP */
-# define COMPILER_VERSION_MAJOR DEC(__IBMCPP__/100)
-# define COMPILER_VERSION_MINOR DEC(__IBMCPP__/10 % 10)
-# define COMPILER_VERSION_PATCH DEC(__IBMCPP__ % 10)
-
-#elif defined(__IBMCPP__) && !defined(__COMPILER_VER__) && __IBMCPP__ < 800
-# define COMPILER_ID "VisualAge"
- /* __IBMCPP__ = VRP */
-# define COMPILER_VERSION_MAJOR DEC(__IBMCPP__/100)
-# define COMPILER_VERSION_MINOR DEC(__IBMCPP__/10 % 10)
-# define COMPILER_VERSION_PATCH DEC(__IBMCPP__ % 10)
-
-#elif defined(__NVCOMPILER)
-# define COMPILER_ID "NVHPC"
-# define COMPILER_VERSION_MAJOR DEC(__NVCOMPILER_MAJOR__)
-# define COMPILER_VERSION_MINOR DEC(__NVCOMPILER_MINOR__)
-# if defined(__NVCOMPILER_PATCHLEVEL__)
-# define COMPILER_VERSION_PATCH DEC(__NVCOMPILER_PATCHLEVEL__)
-# endif
-
-#elif defined(__PGI)
-# define COMPILER_ID "PGI"
-# define COMPILER_VERSION_MAJOR DEC(__PGIC__)
-# define COMPILER_VERSION_MINOR DEC(__PGIC_MINOR__)
-# if defined(__PGIC_PATCHLEVEL__)
-# define COMPILER_VERSION_PATCH DEC(__PGIC_PATCHLEVEL__)
-# endif
-
-#elif defined(_CRAYC)
-# define COMPILER_ID "Cray"
-# define COMPILER_VERSION_MAJOR DEC(_RELEASE_MAJOR)
-# define COMPILER_VERSION_MINOR DEC(_RELEASE_MINOR)
-
-#elif defined(__TI_COMPILER_VERSION__)
-# define COMPILER_ID "TI"
- /* __TI_COMPILER_VERSION__ = VVVRRRPPP */
-# define COMPILER_VERSION_MAJOR DEC(__TI_COMPILER_VERSION__/1000000)
-# define COMPILER_VERSION_MINOR DEC(__TI_COMPILER_VERSION__/1000 % 1000)
-# define COMPILER_VERSION_PATCH DEC(__TI_COMPILER_VERSION__ % 1000)
-
-#elif defined(__FUJITSU) || defined(__FCC_VERSION) || defined(__fcc_version)
-# define COMPILER_ID "Fujitsu"
-
-#elif defined(__ghs__)
-# define COMPILER_ID "GHS"
-/* __GHS_VERSION_NUMBER = VVVVRP */
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-# define COMPILER_VERSION_MAJOR DEC(__GHS_VERSION_NUMBER / 100)
-# define COMPILER_VERSION_MINOR DEC(__GHS_VERSION_NUMBER / 10 % 10)
-# define COMPILER_VERSION_PATCH DEC(__GHS_VERSION_NUMBER % 10)
-# endif
-
-#elif defined(__SCO_VERSION__)
-# define COMPILER_ID "SCO"
-
-#elif defined(__ARMCC_VERSION) && !defined(__clang__)
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- /* __ARMCC_VERSION = VRRPPPP */
- # define COMPILER_VERSION_MAJOR DEC(__ARMCC_VERSION/1000000)
- # define COMPILER_VERSION_MINOR DEC(__ARMCC_VERSION/10000 % 100)
- # define COMPILER_VERSION_PATCH DEC(__ARMCC_VERSION % 10000)
-#else
- /* __ARMCC_VERSION = VRPPPP */
- # define COMPILER_VERSION_MAJOR DEC(__ARMCC_VERSION/100000)
- # define COMPILER_VERSION_MINOR DEC(__ARMCC_VERSION/10000 % 10)
- # define COMPILER_VERSION_PATCH DEC(__ARMCC_VERSION % 10000)
-#endif
-
-
-#elif defined(__clang__) && defined(__apple_build_version__)
-# define COMPILER_ID "AppleClang"
-# if defined(_MSC_VER)
-# define SIMULATE_ID "MSVC"
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-# define COMPILER_VERSION_MAJOR DEC(__clang_major__)
-# define COMPILER_VERSION_MINOR DEC(__clang_minor__)
-# define COMPILER_VERSION_PATCH DEC(__clang_patchlevel__)
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- /* _MSC_VER = VVRR */
-# define SIMULATE_VERSION_MAJOR DEC(_MSC_VER / 100)
-# define SIMULATE_VERSION_MINOR DEC(_MSC_VER % 100)
-# endif
-# define COMPILER_VERSION_TWEAK DEC(__apple_build_version__)
-
-#elif defined(__clang__) && defined(__ARMCOMPILER_VERSION)
-# define COMPILER_ID "ARMClang"
- # define COMPILER_VERSION_MAJOR DEC(__ARMCOMPILER_VERSION/1000000)
- # define COMPILER_VERSION_MINOR DEC(__ARMCOMPILER_VERSION/10000 % 100)
- # define COMPILER_VERSION_PATCH DEC(__ARMCOMPILER_VERSION % 10000)
-# define COMPILER_VERSION_INTERNAL DEC(__ARMCOMPILER_VERSION)
-
-#elif defined(__clang__)
-# define COMPILER_ID "Clang"
-# if defined(_MSC_VER)
-# define SIMULATE_ID "MSVC"
-# endif
-# define COMPILER_VERSION_MAJOR DEC(__clang_major__)
-# define COMPILER_VERSION_MINOR DEC(__clang_minor__)
-# define COMPILER_VERSION_PATCH DEC(__clang_patchlevel__)
-# if defined(_MSC_VER)
- /* _MSC_VER = VVRR */
-# define SIMULATE_VERSION_MAJOR DEC(_MSC_VER / 100)
-# define SIMULATE_VERSION_MINOR DEC(_MSC_VER % 100)
-# endif
-
-#elif defined(__GNUC__) || defined(__GNUG__)
-# define COMPILER_ID "GNU"
-# if defined(__GNUC__)
-# define COMPILER_VERSION_MAJOR DEC(__GNUC__)
-# else
-# define COMPILER_VERSION_MAJOR DEC(__GNUG__)
-# endif
-# if defined(__GNUC_MINOR__)
-# define COMPILER_VERSION_MINOR DEC(__GNUC_MINOR__)
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-# define COMPILER_VERSION_PATCH DEC(__GNUC_PATCHLEVEL__)
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-
-#elif defined(_MSC_VER)
-# define COMPILER_ID "MSVC"
- /* _MSC_VER = VVRR */
-# define COMPILER_VERSION_MAJOR DEC(_MSC_VER / 100)
-# define COMPILER_VERSION_MINOR DEC(_MSC_VER % 100)
-# if defined(_MSC_FULL_VER)
-# if _MSC_VER >= 1400
- /* _MSC_FULL_VER = VVRRPPPPP */
-# define COMPILER_VERSION_PATCH DEC(_MSC_FULL_VER % 100000)
-# else
- /* _MSC_FULL_VER = VVRRPPPP */
-# define COMPILER_VERSION_PATCH DEC(_MSC_FULL_VER % 10000)
-# endif
-# endif
-# if defined(_MSC_BUILD)
-# define COMPILER_VERSION_TWEAK DEC(_MSC_BUILD)
-# endif
-
-#elif defined(__VISUALDSPVERSION__) || defined(__ADSPBLACKFIN__) || defined(__ADSPTS__) || defined(__ADSP21000__)
-# define COMPILER_ID "ADSP"
-#if defined(__VISUALDSPVERSION__)
- /* __VISUALDSPVERSION__ = 0xVVRRPP00 */
-# define COMPILER_VERSION_MAJOR HEX(__VISUALDSPVERSION__>>24)
-# define COMPILER_VERSION_MINOR HEX(__VISUALDSPVERSION__>>16 & 0xFF)
-# define COMPILER_VERSION_PATCH HEX(__VISUALDSPVERSION__>>8 & 0xFF)
-#endif
-
-#elif defined(__IAR_SYSTEMS_ICC__) || defined(__IAR_SYSTEMS_ICC)
-# define COMPILER_ID "IAR"
-# if defined(__VER__) && defined(__ICCARM__)
-# define COMPILER_VERSION_MAJOR DEC((__VER__) / 1000000)
-# define COMPILER_VERSION_MINOR DEC(((__VER__) / 1000) % 1000)
-# define COMPILER_VERSION_PATCH DEC((__VER__) % 1000)
-# define COMPILER_VERSION_INTERNAL DEC(__IAR_SYSTEMS_ICC__)
-# elif defined(__VER__) && (defined(__ICCAVR__) || defined(__ICCRX__) || defined(__ICCRH850__) || defined(__ICCRL78__) || defined(__ICC430__) || defined(__ICCRISCV__) || defined(__ICCV850__) || defined(__ICC8051__) || defined(__ICCSTM8__))
-# define COMPILER_VERSION_MAJOR DEC((__VER__) / 100)
-# define COMPILER_VERSION_MINOR DEC((__VER__) - (((__VER__) / 100)*100))
-# define COMPILER_VERSION_PATCH DEC(__SUBVERSION__)
-# define COMPILER_VERSION_INTERNAL DEC(__IAR_SYSTEMS_ICC__)
-# endif
-
-
-/* These compilers are either not known or too old to define an
- identification macro. Try to identify the platform and guess that
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-
-#else /* unknown compiler */
-# define COMPILER_ID ""
-#endif
-
-/* Construct the string literal in pieces to prevent the source from
- getting matched. Store it in a pointer rather than an array
- because some compilers will just produce instructions to fill the
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-#ifdef SIMULATE_ID
-char const* info_simulate = "INFO" ":" "simulate[" SIMULATE_ID "]";
-#endif
-
-#ifdef __QNXNTO__
-char const* qnxnto = "INFO" ":" "qnxnto[]";
-#endif
-
-#if defined(__CRAYXT_COMPUTE_LINUX_TARGET)
-char const *info_cray = "INFO" ":" "compiler_wrapper[CrayPrgEnv]";
-#endif
-
-#define STRINGIFY_HELPER(X) #X
-#define STRINGIFY(X) STRINGIFY_HELPER(X)
-
-/* Identify known platforms by name. */
-#if defined(__linux) || defined(__linux__) || defined(linux)
-# define PLATFORM_ID "Linux"
-
-#elif defined(__CYGWIN__)
-# define PLATFORM_ID "Cygwin"
-
-#elif defined(__MINGW32__)
-# define PLATFORM_ID "MinGW"
-
-#elif defined(__APPLE__)
-# define PLATFORM_ID "Darwin"
-
-#elif defined(_WIN32) || defined(__WIN32__) || defined(WIN32)
-# define PLATFORM_ID "Windows"
-
-#elif defined(__FreeBSD__) || defined(__FreeBSD)
-# define PLATFORM_ID "FreeBSD"
-
-#elif defined(__NetBSD__) || defined(__NetBSD)
-# define PLATFORM_ID "NetBSD"
-
-#elif defined(__OpenBSD__) || defined(__OPENBSD)
-# define PLATFORM_ID "OpenBSD"
-
-#elif defined(__sun) || defined(sun)
-# define PLATFORM_ID "SunOS"
-
-#elif defined(_AIX) || defined(__AIX) || defined(__AIX__) || defined(__aix) || defined(__aix__)
-# define PLATFORM_ID "AIX"
-
-#elif defined(__hpux) || defined(__hpux__)
-# define PLATFORM_ID "HP-UX"
-
-#elif defined(__HAIKU__)
-# define PLATFORM_ID "Haiku"
-
-#elif defined(__BeOS) || defined(__BEOS__) || defined(_BEOS)
-# define PLATFORM_ID "BeOS"
-
-#elif defined(__QNX__) || defined(__QNXNTO__)
-# define PLATFORM_ID "QNX"
-
-#elif defined(__tru64) || defined(_tru64) || defined(__TRU64__)
-# define PLATFORM_ID "Tru64"
-
-#elif defined(__riscos) || defined(__riscos__)
-# define PLATFORM_ID "RISCos"
-
-#elif defined(__sinix) || defined(__sinix__) || defined(__SINIX__)
-# define PLATFORM_ID "SINIX"
-
-#elif defined(__UNIX_SV__)
-# define PLATFORM_ID "UNIX_SV"
-
-#elif defined(__bsdos__)
-# define PLATFORM_ID "BSDOS"
-
-#elif defined(_MPRAS) || defined(MPRAS)
-# define PLATFORM_ID "MP-RAS"
-
-#elif defined(__osf) || defined(__osf__)
-# define PLATFORM_ID "OSF1"
-
-#elif defined(_SCO_SV) || defined(SCO_SV) || defined(sco_sv)
-# define PLATFORM_ID "SCO_SV"
-
-#elif defined(__ultrix) || defined(__ultrix__) || defined(_ULTRIX)
-# define PLATFORM_ID "ULTRIX"
-
-#elif defined(__XENIX__) || defined(_XENIX) || defined(XENIX)
-# define PLATFORM_ID "Xenix"
-
-#elif defined(__WATCOMC__)
-# if defined(__LINUX__)
-# define PLATFORM_ID "Linux"
-
-# elif defined(__DOS__)
-# define PLATFORM_ID "DOS"
-
-# elif defined(__OS2__)
-# define PLATFORM_ID "OS2"
-
-# elif defined(__WINDOWS__)
-# define PLATFORM_ID "Windows3x"
-
-# elif defined(__VXWORKS__)
-# define PLATFORM_ID "VxWorks"
-
-# else /* unknown platform */
-# define PLATFORM_ID
-# endif
-
-#elif defined(__INTEGRITY)
-# if defined(INT_178B)
-# define PLATFORM_ID "Integrity178"
-
-# else /* regular Integrity */
-# define PLATFORM_ID "Integrity"
-# endif
-
-#else /* unknown platform */
-# define PLATFORM_ID
-
-#endif
-
-/* For windows compilers MSVC and Intel we can determine
- the architecture of the compiler being used. This is because
- the compilers do not have flags that can change the architecture,
- but rather depend on which compiler is being used
-*/
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-# if defined(_M_IA64)
-# define ARCHITECTURE_ID "IA64"
-
-# elif defined(_M_ARM64EC)
-# define ARCHITECTURE_ID "ARM64EC"
-
-# elif defined(_M_X64) || defined(_M_AMD64)
-# define ARCHITECTURE_ID "x64"
-
-# elif defined(_M_IX86)
-# define ARCHITECTURE_ID "X86"
-
-# elif defined(_M_ARM64)
-# define ARCHITECTURE_ID "ARM64"
-
-# elif defined(_M_ARM)
-# if _M_ARM == 4
-# define ARCHITECTURE_ID "ARMV4I"
-# elif _M_ARM == 5
-# define ARCHITECTURE_ID "ARMV5I"
-# else
-# define ARCHITECTURE_ID "ARMV" STRINGIFY(_M_ARM)
-# endif
-
-# elif defined(_M_MIPS)
-# define ARCHITECTURE_ID "MIPS"
-
-# elif defined(_M_SH)
-# define ARCHITECTURE_ID "SHx"
-
-# else /* unknown architecture */
-# define ARCHITECTURE_ID ""
-# endif
-
-#elif defined(__WATCOMC__)
-# if defined(_M_I86)
-# define ARCHITECTURE_ID "I86"
-
-# elif defined(_M_IX86)
-# define ARCHITECTURE_ID "X86"
-
-# else /* unknown architecture */
-# define ARCHITECTURE_ID ""
-# endif
-
-#elif defined(__IAR_SYSTEMS_ICC__) || defined(__IAR_SYSTEMS_ICC)
-# if defined(__ICCARM__)
-# define ARCHITECTURE_ID "ARM"
-
-# elif defined(__ICCRX__)
-# define ARCHITECTURE_ID "RX"
-
-# elif defined(__ICCRH850__)
-# define ARCHITECTURE_ID "RH850"
-
-# elif defined(__ICCRL78__)
-# define ARCHITECTURE_ID "RL78"
-
-# elif defined(__ICCRISCV__)
-# define ARCHITECTURE_ID "RISCV"
-
-# elif defined(__ICCAVR__)
-# define ARCHITECTURE_ID "AVR"
-
-# elif defined(__ICC430__)
-# define ARCHITECTURE_ID "MSP430"
-
-# elif defined(__ICCV850__)
-# define ARCHITECTURE_ID "V850"
-
-# elif defined(__ICC8051__)
-# define ARCHITECTURE_ID "8051"
-
-# elif defined(__ICCSTM8__)
-# define ARCHITECTURE_ID "STM8"
-
-# else /* unknown architecture */
-# define ARCHITECTURE_ID ""
-# endif
-
-#elif defined(__ghs__)
-# if defined(__PPC64__)
-# define ARCHITECTURE_ID "PPC64"
-
-# elif defined(__ppc__)
-# define ARCHITECTURE_ID "PPC"
-
-# elif defined(__ARM__)
-# define ARCHITECTURE_ID "ARM"
-
-# elif defined(__x86_64__)
-# define ARCHITECTURE_ID "x64"
-
-# elif defined(__i386__)
-# define ARCHITECTURE_ID "X86"
-
-# else /* unknown architecture */
-# define ARCHITECTURE_ID ""
-# endif
-
-#elif defined(__TI_COMPILER_VERSION__)
-# if defined(__TI_ARM__)
-# define ARCHITECTURE_ID "ARM"
-
-# elif defined(__MSP430__)
-# define ARCHITECTURE_ID "MSP430"
-
-# elif defined(__TMS320C28XX__)
-# define ARCHITECTURE_ID "TMS320C28x"
-
-# elif defined(__TMS320C6X__) || defined(_TMS320C6X)
-# define ARCHITECTURE_ID "TMS320C6x"
-
-# else /* unknown architecture */
-# define ARCHITECTURE_ID ""
-# endif
-
-#else
-# define ARCHITECTURE_ID
-#endif
-
-/* Convert integer to decimal digit literals. */
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diff --git a/test/4_Lulesh/lulesh-init.mini.cc b/test/4_Lulesh/lulesh-init.mini.cc
deleted file mode 100644
index a62ee95..0000000
--- a/test/4_Lulesh/lulesh-init.mini.cc
+++ /dev/null
@@ -1,639 +0,0 @@
-#include "math.h"
-#include "stdio.h"
-#include "stdlib.h"
-#include "string.h"
-#include "limits.h"
-#include "cstdlib"
-#include "lulesh.h"
-Domain::Domain(Int_t numRanks, Index_t colLoc,
- Index_t rowLoc, Index_t planeLoc,
- Index_t nx, Int_t tp, Int_t nr, Int_t balance, Int_t cost)
- :
- m_e_cut(Real_t(1.0e-7)),
- m_p_cut(Real_t(1.0e-7)),
- m_q_cut(Real_t(1.0e-7)),
- m_v_cut(Real_t(1.0e-10)),
- m_u_cut(Real_t(1.0e-7)),
- m_hgcoef(Real_t(3.0)),
- m_ss4o3(Real_t(4.0)/Real_t(3.0)),
- m_qstop(Real_t(1.0e+12)),
- m_monoq_max_slope(Real_t(1.0)),
- m_monoq_limiter_mult(Real_t(2.0)),
- m_qlc_monoq(Real_t(0.5)),
- m_qqc_monoq(Real_t(2.0)/Real_t(3.0)),
- m_qqc(Real_t(2.0)),
- m_eosvmax(Real_t(1.0e+9)),
- m_eosvmin(Real_t(1.0e-9)),
- m_pmin(Real_t(0.)),
- m_emin(Real_t(-1.0e+15)),
- m_dvovmax(Real_t(0.1)),
- m_refdens(Real_t(1.0)),
-//
-// set pointers to (potentially) "new'd" arrays to null to
-// simplify deallocation.
-//
- m_regNumList(0),
- m_nodeElemStart(0),
- m_nodeElemCornerList(0),
- m_regElemSize(0),
- m_regElemlist(0)
-#if USE_MPI
- ,
- commDataSend(0),
- commDataRecv(0)
-#endif
-{
-
- Index_t edgeElems = nx ;
- Index_t edgeNodes = edgeElems+1 ;
- this->cost() = cost;
-
- m_tp = tp ;
- m_numRanks = numRanks ;
-
- ///////////////////////////////
- // Initialize Sedov Mesh
- ///////////////////////////////
-
- // construct a uniform box for this processor
-
- m_colLoc = colLoc ;
- m_rowLoc = rowLoc ;
- m_planeLoc = planeLoc ;
-
- m_sizeX = edgeElems ;
- m_sizeY = edgeElems ;
- m_sizeZ = edgeElems ;
- m_numElem = edgeElems*edgeElems*edgeElems ;
-
- m_numNode = edgeNodes*edgeNodes*edgeNodes ;
-
- m_regNumList = new Index_t[numElem()] ; // material indexset
-
- // Elem-centered
- AllocateElemPersistent(numElem()) ;
-
- // Node-centered
- AllocateNodePersistent(numNode()) ;
-
- SetupCommBuffers(edgeNodes);
-
- // Basic Field Initialization
- for (Index_t i=0; i<numElem(); ++i) {
- e(i) = Real_t(0.0) ;
- p(i) = Real_t(0.0) ;
- q(i) = Real_t(0.0) ;
- ss(i) = Real_t(0.0) ;
- }
-
- // Note - v initializes to 1.0, not 0.0!
- for (Index_t i=0; i<numElem(); ++i) {
- v(i) = Real_t(1.0) ;
- }
-
- for (Index_t i=0; i<numNode(); ++i) {
- xd(i) = Real_t(0.0) ;
- yd(i) = Real_t(0.0) ;
- zd(i) = Real_t(0.0) ;
- }
-
- for (Index_t i=0; i<numNode(); ++i) {
- xdd(i) = Real_t(0.0) ;
- ydd(i) = Real_t(0.0) ;
- zdd(i) = Real_t(0.0) ;
- }
-
- for (Index_t i=0; i<numNode(); ++i) {
- nodalMass(i) = Real_t(0.0) ;
- }
-
- BuildMesh(nx, edgeNodes, edgeElems);
-
-#if _OPENMP
- SetupThreadSupportStructures();
-#endif
-
- // Setup region index sets. For now, these are constant sized
- // throughout the run, but could be changed every cycle to
- // simulate effects of ALE on the lagrange solver
- CreateRegionIndexSets(nr, balance);
-
- // Setup symmetry nodesets
- SetupSymmetryPlanes(edgeNodes);
-
- // Setup element connectivities
- SetupElementConnectivities(edgeElems);
-
- // Setup symmetry planes and free surface boundary arrays
- SetupBoundaryConditions(edgeElems);
-
-
- // Setup defaults
-
- // These can be changed (requires recompile) if you want to run
- // with a fixed timestep, or to a different end time, but it's
- // probably easier/better to just run a fixed number of timesteps
- // using the -i flag in 2.x
-
- dtfixed() = Real_t(-1.0e-6) ; // Negative means use courant condition
- stoptime() = Real_t(1.0e-2); // *Real_t(edgeElems*tp/45.0) ;
-
- // Initial conditions
- deltatimemultlb() = Real_t(1.1) ;
- deltatimemultub() = Real_t(1.2) ;
- dtcourant() = Real_t(1.0e+20) ;
- dthydro() = Real_t(1.0e+20) ;
- dtmax() = Real_t(1.0e-2) ;
- time() = Real_t(0.) ;
- cycle() = Int_t(0) ;
-
- // initialize field data
- for (Index_t i=0; i<numElem(); ++i) {
- Real_t x_local[8], y_local[8], z_local[8] ;
- Index_t *elemToNode = nodelist(i) ;
- for( Index_t lnode=0 ; lnode<8 ; ++lnode )
- {
- Index_t gnode = elemToNode[lnode];
- x_local[lnode] = x(gnode);
- y_local[lnode] = y(gnode);
- z_local[lnode] = z(gnode);
- }
-
- // volume calculations
- Real_t volume = CalcElemVolume(x_local, y_local, z_local );
- volo(i) = volume ;
- elemMass(i) = volume ;
- for (Index_t j=0; j<8; ++j) {
- Index_t idx = elemToNode[j] ;
- nodalMass(idx) += volume / Real_t(8.0) ;
- }
- }
-
- // deposit initial energy
- // An energy of 3.948746e+7 is correct for a problem with
- // 45 zones along a side - we need to scale it
- const Real_t ebase = Real_t(3.948746e+7);
- Real_t scale = (nx*m_tp)/Real_t(45.0);
- Real_t einit = ebase*scale*scale*scale;
- if (m_rowLoc + m_colLoc + m_planeLoc == 0) {
- // Dump into the first zone (which we know is in the corner)
- // of the domain that sits at the origin
- e(0) = einit;
- }
- //set initial deltatime base on analytic CFL calculation
- deltatime() = (Real_t(.5)*cbrt(volo(0)))/sqrt(Real_t(2.0)*einit);
-
-}
-Domain::~Domain()
-{
- delete [] m_regNumList;
- delete [] m_nodeElemStart;
- delete [] m_nodeElemCornerList;
- delete [] m_regElemSize;
- for (Index_t i=0 ; i<numReg() ; ++i) {
- delete [] m_regElemlist[i];
- }
- delete [] m_regElemlist;
-
-#if USE_MPI
- delete [] commDataSend;
- delete [] commDataRecv;
-#endif
-}
-void
-Domain::BuildMesh(Int_t nx, Int_t edgeNodes, Int_t edgeElems)
-{
- Index_t meshEdgeElems = m_tp*nx ;
-
- // initialize nodal coordinates
- Index_t nidx = 0 ;
- Real_t tz = Real_t(1.125)*Real_t(m_planeLoc*nx)/Real_t(meshEdgeElems) ;
- for (Index_t plane=0; plane<edgeNodes; ++plane) {
- Real_t ty = Real_t(1.125)*Real_t(m_rowLoc*nx)/Real_t(meshEdgeElems) ;
- for (Index_t row=0; row<edgeNodes; ++row) {
- Real_t tx = Real_t(1.125)*Real_t(m_colLoc*nx)/Real_t(meshEdgeElems) ;
- for (Index_t col=0; col<edgeNodes; ++col) {
- x(nidx) = tx ;
- y(nidx) = ty ;
- z(nidx) = tz ;
- ++nidx ;
- // tx += ds ; // may accumulate roundoff...
- tx = Real_t(1.125)*Real_t(m_colLoc*nx+col+1)/Real_t(meshEdgeElems) ;
- }
- // ty += ds ; // may accumulate roundoff...
- ty = Real_t(1.125)*Real_t(m_rowLoc*nx+row+1)/Real_t(meshEdgeElems) ;
- }
- // tz += ds ; // may accumulate roundoff...
- tz = Real_t(1.125)*Real_t(m_planeLoc*nx+plane+1)/Real_t(meshEdgeElems) ;
- }
-
-
- // embed hexehedral elements in nodal point lattice
- Index_t zidx = 0 ;
- nidx = 0 ;
- for (Index_t plane=0; plane<edgeElems; ++plane) {
- for (Index_t row=0; row<edgeElems; ++row) {
- for (Index_t col=0; col<edgeElems; ++col) {
- Index_t *localNode = nodelist(zidx) ;
- localNode[0] = nidx ;
- localNode[1] = nidx + 1 ;
- localNode[2] = nidx + edgeNodes + 1 ;
- localNode[3] = nidx + edgeNodes ;
- localNode[4] = nidx + edgeNodes*edgeNodes ;
- localNode[5] = nidx + edgeNodes*edgeNodes + 1 ;
- localNode[6] = nidx + edgeNodes*edgeNodes + edgeNodes + 1 ;
- localNode[7] = nidx + edgeNodes*edgeNodes + edgeNodes ;
- ++zidx ;
- ++nidx ;
- }
- ++nidx ;
- }
- nidx += edgeNodes ;
- }
-}
-void
-Domain::SetupCommBuffers(Int_t edgeNodes)
-{
- // allocate a buffer large enough for nodal ghost data
- Index_t maxEdgeSize = MAX(this->sizeX(), MAX(this->sizeY(), this->sizeZ()))+1 ;
- m_maxPlaneSize = CACHE_ALIGN_REAL(maxEdgeSize*maxEdgeSize) ;
- m_maxEdgeSize = CACHE_ALIGN_REAL(maxEdgeSize) ;
-
- // assume communication to 6 neighbors by default
- m_rowMin = (m_rowLoc == 0) ? 0 : 1;
- m_rowMax = (m_rowLoc == m_tp-1) ? 0 : 1;
- m_colMin = (m_colLoc == 0) ? 0 : 1;
- m_colMax = (m_colLoc == m_tp-1) ? 0 : 1;
- m_planeMin = (m_planeLoc == 0) ? 0 : 1;
- m_planeMax = (m_planeLoc == m_tp-1) ? 0 : 1;
-
-#if USE_MPI
- // account for face communication
- Index_t comBufSize =
- (m_rowMin + m_rowMax + m_colMin + m_colMax + m_planeMin + m_planeMax) *
- m_maxPlaneSize * MAX_FIELDS_PER_MPI_COMM ;
-
- // account for edge communication
- comBufSize +=
- ((m_rowMin & m_colMin) + (m_rowMin & m_planeMin) + (m_colMin & m_planeMin) +
- (m_rowMax & m_colMax) + (m_rowMax & m_planeMax) + (m_colMax & m_planeMax) +
- (m_rowMax & m_colMin) + (m_rowMin & m_planeMax) + (m_colMin & m_planeMax) +
- (m_rowMin & m_colMax) + (m_rowMax & m_planeMin) + (m_colMax & m_planeMin)) *
- m_maxEdgeSize * MAX_FIELDS_PER_MPI_COMM ;
-
- // account for corner communication
- // factor of 16 is so each buffer has its own cache line
- comBufSize += ((m_rowMin & m_colMin & m_planeMin) +
- (m_rowMin & m_colMin & m_planeMax) +
- (m_rowMin & m_colMax & m_planeMin) +
- (m_rowMin & m_colMax & m_planeMax) +
- (m_rowMax & m_colMin & m_planeMin) +
- (m_rowMax & m_colMin & m_planeMax) +
- (m_rowMax & m_colMax & m_planeMin) +
- (m_rowMax & m_colMax & m_planeMax)) * CACHE_COHERENCE_PAD_REAL ;
-
- this->commDataSend = new Real_t[comBufSize] ;
- this->commDataRecv = new Real_t[comBufSize] ;
- // prevent floating point exceptions
- memset(this->commDataSend, 0, comBufSize*sizeof(Real_t)) ;
- memset(this->commDataRecv, 0, comBufSize*sizeof(Real_t)) ;
-#endif
-
- // Boundary nodesets
- if (m_colLoc == 0)
- m_symmX.resize(edgeNodes*edgeNodes);
- if (m_rowLoc == 0)
- m_symmY.resize(edgeNodes*edgeNodes);
- if (m_planeLoc == 0)
- m_symmZ.resize(edgeNodes*edgeNodes);
-}
-void
-Domain::CreateRegionIndexSets(Int_t nr, Int_t balance)
-{
-#if USE_MPI
- int myRank;
- MPI_Comm_rank(MPI_COMM_WORLD, &myRank) ;
- srand(myRank);
-#else
- srand(0);
- Index_t myRank = 0;
-#endif
- this->numReg() = nr;
- m_regElemSize = new Index_t[numReg()];
- m_regElemlist = new Index_t*[numReg()];
- Index_t nextIndex = 0;
- //if we only have one region just fill it
- // Fill out the regNumList with material numbers, which are always
- // the region index plus one
- if(numReg() == 1) {
- while (nextIndex < numElem()) {
- this->regNumList(nextIndex) = 1;
- nextIndex++;
- }
- regElemSize(0) = 0;
- }
- //If we have more than one region distribute the elements.
- else {
- Int_t regionNum;
- Int_t regionVar;
- Int_t lastReg = -1;
- Int_t binSize;
- Index_t elements;
- Index_t runto = 0;
- Int_t costDenominator = 0;
- Int_t* regBinEnd = new Int_t[numReg()];
- //Determine the relative weights of all the regions. This is based off the -b flag. Balance is the value passed into b.
- for (Index_t i=0 ; i<numReg() ; ++i) {
- regElemSize(i) = 0;
- costDenominator += pow((i+1), balance); //Total sum of all regions weights
- regBinEnd[i] = costDenominator; //Chance of hitting a given region is (regBinEnd[i] - regBinEdn[i-1])/costDenominator
- }
- //Until all elements are assigned
- while (nextIndex < numElem()) {
- //pick the region
- regionVar = rand() % costDenominator;
- Index_t i = 0;
- while(regionVar >= regBinEnd[i])
- i++;
- //rotate the regions based on MPI rank. Rotation is Rank % NumRegions this makes each domain have a different region with
- //the highest representation
- regionNum = ((i + myRank) % numReg()) + 1;
- // make sure we don't pick the same region twice in a row
- while(regionNum == lastReg) {
- regionVar = rand() % costDenominator;
- i = 0;
- while(regionVar >= regBinEnd[i])
- i++;
- regionNum = ((i + myRank) % numReg()) + 1;
- }
- //Pick the bin size of the region and determine the number of elements.
- binSize = rand() % 1000;
- if(binSize < 773) {
- elements = rand() % 15 + 1;
- }
- else if(binSize < 937) {
- elements = rand() % 16 + 16;
- }
- else if(binSize < 970) {
- elements = rand() % 32 + 32;
- }
- else if(binSize < 974) {
- elements = rand() % 64 + 64;
- }
- else if(binSize < 978) {
- elements = rand() % 128 + 128;
- }
- else if(binSize < 981) {
- elements = rand() % 256 + 256;
- }
- else
- elements = rand() % 1537 + 512;
- runto = elements + nextIndex;
- //Store the elements. If we hit the end before we run out of elements then just stop.
- while (nextIndex < runto && nextIndex < numElem()) {
- this->regNumList(nextIndex) = regionNum;
- nextIndex++;
- }
- lastReg = regionNum;
- }
-
- delete [] regBinEnd;
- }
- // Convert regNumList to region index sets
- // First, count size of each region
- for (Index_t i=0 ; i<numElem() ; ++i) {
- int r = this->regNumList(i)-1; // region index == regnum-1
- regElemSize(r)++;
- }
- // Second, allocate each region index set
- for (Index_t i=0 ; i<numReg() ; ++i) {
- m_regElemlist[i] = new Index_t[regElemSize(i)];
- regElemSize(i) = 0;
- }
- // Third, fill index sets
- for (Index_t i=0 ; i<numElem() ; ++i) {
- Index_t r = regNumList(i)-1; // region index == regnum-1
- Index_t regndx = regElemSize(r)++; // Note increment
- regElemlist(r,regndx) = i;
- }
-
-}
-void
-Domain::SetupSymmetryPlanes(Int_t edgeNodes)
-{
- Index_t nidx = 0 ;
- for (Index_t i=0; i<edgeNodes; ++i) {
- Index_t planeInc = i*edgeNodes*edgeNodes ;
- Index_t rowInc = i*edgeNodes ;
- for (Index_t j=0; j<edgeNodes; ++j) {
- if (m_planeLoc == 0) {
- m_symmZ[nidx] = rowInc + j ;
- }
- if (m_rowLoc == 0) {
- m_symmY[nidx] = planeInc + j ;
- }
- if (m_colLoc == 0) {
- m_symmX[nidx] = planeInc + j*edgeNodes ;
- }
- ++nidx ;
- }
- }
-}
-void
-Domain::SetupElementConnectivities(Int_t edgeElems)
-{
- lxim(0) = 0 ;
- for (Index_t i=1; i<numElem(); ++i) {
- lxim(i) = i-1 ;
- lxip(i-1) = i ;
- }
- lxip(numElem()-1) = numElem()-1 ;
-
- for (Index_t i=0; i<edgeElems; ++i) {
- letam(i) = i ;
- letap(numElem()-edgeElems+i) = numElem()-edgeElems+i ;
- }
- for (Index_t i=edgeElems; i<numElem(); ++i) {
- letam(i) = i-edgeElems ;
- letap(i-edgeElems) = i ;
- }
-
- for (Index_t i=0; i<edgeElems*edgeElems; ++i) {
- lzetam(i) = i ;
- lzetap(numElem()-edgeElems*edgeElems+i) = numElem()-edgeElems*edgeElems+i ;
- }
- for (Index_t i=edgeElems*edgeElems; i<numElem(); ++i) {
- lzetam(i) = i - edgeElems*edgeElems ;
- lzetap(i-edgeElems*edgeElems) = i ;
- }
-}
-void
-Domain::SetupBoundaryConditions(Int_t edgeElems)
-{
- Index_t ghostIdx[6] ; // offsets to ghost locations
-
- // set up boundary condition information
- for (Index_t i=0; i<numElem(); ++i) {
- elemBC(i) = Int_t(0) ;
- }
-
- for (Index_t i=0; i<6; ++i) {
- ghostIdx[i] = INT_MIN ;
- }
-
- Int_t pidx = numElem() ;
- if (m_planeMin != 0) {
- ghostIdx[0] = pidx ;
- pidx += sizeX()*sizeY() ;
- }
-
- if (m_planeMax != 0) {
- ghostIdx[1] = pidx ;
- pidx += sizeX()*sizeY() ;
- }
-
- if (m_rowMin != 0) {
- ghostIdx[2] = pidx ;
- pidx += sizeX()*sizeZ() ;
- }
-
- if (m_rowMax != 0) {
- ghostIdx[3] = pidx ;
- pidx += sizeX()*sizeZ() ;
- }
-
- if (m_colMin != 0) {
- ghostIdx[4] = pidx ;
- pidx += sizeY()*sizeZ() ;
- }
-
- if (m_colMax != 0) {
- ghostIdx[5] = pidx ;
- }
-
- // symmetry plane or free surface BCs
- for (Index_t i=0; i<edgeElems; ++i) {
- Index_t planeInc = i*edgeElems*edgeElems ;
- Index_t rowInc = i*edgeElems ;
- for (Index_t j=0; j<edgeElems; ++j) {
- if (m_planeLoc == 0) {
- elemBC(rowInc+j) |= ZETA_M_SYMM ;
- }
- else {
- elemBC(rowInc+j) |= ZETA_M_COMM ;
- lzetam(rowInc+j) = ghostIdx[0] + rowInc + j ;
- }
-
- if (m_planeLoc == m_tp-1) {
- elemBC(rowInc+j+numElem()-edgeElems*edgeElems) |=
- ZETA_P_FREE;
- }
- else {
- elemBC(rowInc+j+numElem()-edgeElems*edgeElems) |=
- ZETA_P_COMM ;
- lzetap(rowInc+j+numElem()-edgeElems*edgeElems) =
- ghostIdx[1] + rowInc + j ;
- }
-
- if (m_rowLoc == 0) {
- elemBC(planeInc+j) |= ETA_M_SYMM ;
- }
- else {
- elemBC(planeInc+j) |= ETA_M_COMM ;
- letam(planeInc+j) = ghostIdx[2] + rowInc + j ;
- }
-
- if (m_rowLoc == m_tp-1) {
- elemBC(planeInc+j+edgeElems*edgeElems-edgeElems) |=
- ETA_P_FREE ;
- }
- else {
- elemBC(planeInc+j+edgeElems*edgeElems-edgeElems) |=
- ETA_P_COMM ;
- letap(planeInc+j+edgeElems*edgeElems-edgeElems) =
- ghostIdx[3] + rowInc + j ;
- }
-
- if (m_colLoc == 0) {
- elemBC(planeInc+j*edgeElems) |= XI_M_SYMM ;
- }
- else {
- elemBC(planeInc+j*edgeElems) |= XI_M_COMM ;
- lxim(planeInc+j*edgeElems) = ghostIdx[4] + rowInc + j ;
- }
-
- if (m_colLoc == m_tp-1) {
- elemBC(planeInc+j*edgeElems+edgeElems-1) |= XI_P_FREE ;
- }
- else {
- elemBC(planeInc+j*edgeElems+edgeElems-1) |= XI_P_COMM ;
- lxip(planeInc+j*edgeElems+edgeElems-1) =
- ghostIdx[5] + rowInc + j ;
- }
- }
- }
-}
-void InitMeshDecomp(Int_t numRanks, Int_t myRank,
- Int_t *col, Int_t *row, Int_t *plane, Int_t *side)
-{
- Int_t testProcs;
- Int_t dx, dy, dz;
- Int_t myDom;
-
- // Assume cube processor layout for now
- testProcs = Int_t(cbrt(Real_t(numRanks))+0.5) ;
- if (testProcs*testProcs*testProcs != numRanks) {
- printf("Num processors must be a cube of an integer (1, 8, 27, ...)\n") ;
-#if USE_MPI
- MPI_Abort(MPI_COMM_WORLD, -1) ;
-#else
- exit(-1);
-#endif
- }
- if (sizeof(Real_t) != 4 && sizeof(Real_t) != 8) {
- printf("MPI operations only support float and double right now...\n");
-#if USE_MPI
- MPI_Abort(MPI_COMM_WORLD, -1) ;
-#else
- exit(-1);
-#endif
- }
- if (MAX_FIELDS_PER_MPI_COMM > CACHE_COHERENCE_PAD_REAL) {
- printf("corner element comm buffers too small. Fix code.\n") ;
-#if USE_MPI
- MPI_Abort(MPI_COMM_WORLD, -1) ;
-#else
- exit(-1);
-#endif
- }
-
- dx = testProcs ;
- dy = testProcs ;
- dz = testProcs ;
-
- // temporary test
- if (dx*dy*dz != numRanks) {
- printf("error -- must have as many domains as procs\n") ;
-#if USE_MPI
- MPI_Abort(MPI_COMM_WORLD, -1) ;
-#else
- exit(-1);
-#endif
- }
- Int_t remainder = dx*dy*dz % numRanks ;
- if (myRank < remainder) {
- myDom = myRank*( 1+ (dx*dy*dz / numRanks)) ;
- }
- else {
- myDom = remainder*( 1+ (dx*dy*dz / numRanks)) +
- (myRank - remainder)*(dx*dy*dz/numRanks) ;
- }
-
- *col = myDom % dx ;
- *row = (myDom / dx) % dy ;
- *plane = myDom / (dx*dy) ;
- *side = testProcs;
-
- return;
-}
-
diff --git a/test/4_Lulesh/lulesh-util.ipcg b/test/4_Lulesh/lulesh-util.ipcg
deleted file mode 100644
index 555fac4..0000000
--- a/test/4_Lulesh/lulesh-util.ipcg
+++ /dev/null
@@ -1 +0,0 @@
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diff --git a/test/4_Lulesh/lulesh-util.mini.cc b/test/4_Lulesh/lulesh-util.mini.cc
deleted file mode 100644
index a2da9de..0000000
--- a/test/4_Lulesh/lulesh-util.mini.cc
+++ /dev/null
@@ -1,203 +0,0 @@
-#include "string.h"
-#include "stdlib.h"
-#include "ctype.h"
-#include "stdio.h"
-#include "iostream"
-#include "iomanip"
-#include "lulesh.h"
-static void PrintCommandLineOptions(char *execname, int myRank)
-{
- if (myRank == 0) {
-
- printf("Usage: %s [opts]\n", execname);
- printf(" where [opts] is one or more of:\n");
- printf(" -q : quiet mode - suppress all stdout\n");
- printf(" -i <iterations> : number of cycles to run\n");
- printf(" -s <size> : length of cube mesh along side\n");
- printf(" -r <numregions> : Number of distinct regions (def: 11)\n");
- printf(" -b <balance> : Load balance between regions of a domain (def: 1)\n");
- printf(" -c <cost> : Extra cost of more expensive regions (def: 1)\n");
- printf(" -f <numfiles> : Number of files to split viz dump into (def: (np+10)/9)\n");
- printf(" -p : Print out progress\n");
- printf(" -v : Output viz file (requires compiling with -DVIZ_MESH\n");
- printf(" -h : This message\n");
- printf("\n\n");
- }
-}
-static void ParseError(const char *message, int myRank)
-{
- if (myRank == 0) {
- printf("%s\n", message);
-#if USE_MPI
- MPI_Abort(MPI_COMM_WORLD, -1);
-#else
- exit(-1);
-#endif
- }
-}
-void ParseCommandLineOptions(int argc, char *argv[],
- Int_t myRank, struct cmdLineOpts *opts)
-{
- if(argc > 1) {
- int i = 1;
-
- while(i < argc) {
- int ok;
- /* -i <iterations> */
- if(strcmp(argv[i], "-i") == 0) {
- if (i+1 >= argc) {
- ParseError("Missing integer argument to -i", myRank);
- }
- ok = StrToInt(argv[i+1], &(opts->its));
- if(!ok) {
- ParseError("Parse Error on option -i integer value required after argument\n", myRank);
- }
- i+=2;
- }
- /* -s <size, sidelength> */
- else if(strcmp(argv[i], "-s") == 0) {
- if (i+1 >= argc) {
- ParseError("Missing integer argument to -s\n", myRank);
- }
- ok = StrToInt(argv[i+1], &(opts->nx));
- if(!ok) {
- ParseError("Parse Error on option -s integer value required after argument\n", myRank);
- }
- i+=2;
- }
- /* -r <numregions> */
- else if (strcmp(argv[i], "-r") == 0) {
- if (i+1 >= argc) {
- ParseError("Missing integer argument to -r\n", myRank);
- }
- ok = StrToInt(argv[i+1], &(opts->numReg));
- if (!ok) {
- ParseError("Parse Error on option -r integer value required after argument\n", myRank);
- }
- i+=2;
- }
- /* -f <numfilepieces> */
- else if (strcmp(argv[i], "-f") == 0) {
- if (i+1 >= argc) {
- ParseError("Missing integer argument to -f\n", myRank);
- }
- ok = StrToInt(argv[i+1], &(opts->numFiles));
- if (!ok) {
- ParseError("Parse Error on option -f integer value required after argument\n", myRank);
- }
- i+=2;
- }
- /* -p */
- else if (strcmp(argv[i], "-p") == 0) {
- opts->showProg = 1;
- i++;
- }
- /* -q */
- else if (strcmp(argv[i], "-q") == 0) {
- opts->quiet = 1;
- i++;
- }
- else if (strcmp(argv[i], "-b") == 0) {
- if (i+1 >= argc) {
- ParseError("Missing integer argument to -b\n", myRank);
- }
- ok = StrToInt(argv[i+1], &(opts->balance));
- if (!ok) {
- ParseError("Parse Error on option -b integer value required after argument\n", myRank);
- }
- i+=2;
- }
- else if (strcmp(argv[i], "-c") == 0) {
- if (i+1 >= argc) {
- ParseError("Missing integer argument to -c\n", myRank);
- }
- ok = StrToInt(argv[i+1], &(opts->cost));
- if (!ok) {
- ParseError("Parse Error on option -c integer value required after argument\n", myRank);
- }
- i+=2;
- }
- /* -v */
- else if (strcmp(argv[i], "-v") == 0) {
-#if VIZ_MESH
- opts->viz = 1;
-#else
- ParseError("Use of -v requires compiling with -DVIZ_MESH\n", myRank);
-#endif
- i++;
- }
- /* -h */
- else if (strcmp(argv[i], "-h") == 0) {
- PrintCommandLineOptions(argv[0], myRank);
-#if USE_MPI
- MPI_Abort(MPI_COMM_WORLD, 0);
-#else
- exit(0);
-#endif
- }
- else {
- char msg[80];
- PrintCommandLineOptions(argv[0], myRank);
- sprintf(msg, "ERROR: Unknown command line argument: %s\n", argv[i]);
- ParseError(msg, myRank);
- }
- }
- }
-}
-void VerifyAndWriteFinalOutput(Real_t elapsed_time,
- Domain& locDom,
- Int_t nx,
- Int_t numRanks)
-{
- // GrindTime1 only takes a single domain into account, and is thus a good way to measure
- // processor speed indepdendent of MPI parallelism.
- // GrindTime2 takes into account speedups from MPI parallelism.
- // Cast to 64-bit integer to avoid overflows.
- Int8_t nx8 = nx;
- Real_t grindTime1 = ((elapsed_time*1e6)/locDom.cycle())/(nx8*nx8*nx8);
- Real_t grindTime2 = ((elapsed_time*1e6)/locDom.cycle())/(nx8*nx8*nx8*numRanks);
-
- Index_t ElemId = 0;
- std::cout << "Run completed:\n";
- std::cout << " Problem size = " << nx << "\n";
- std::cout << " MPI tasks = " << numRanks << "\n";
- std::cout << " Iteration count = " << locDom.cycle() << "\n";
- std::cout << " Final Origin Energy = ";
- std::cout << std::scientific << std::setprecision(6);
- std::cout << std::setw(12) << locDom.e(ElemId) << "\n";
-
- Real_t MaxAbsDiff = Real_t(0.0);
- Real_t TotalAbsDiff = Real_t(0.0);
- Real_t MaxRelDiff = Real_t(0.0);
-
- for (Index_t j=0; j<nx; ++j) {
- for (Index_t k=j+1; k<nx; ++k) {
- Real_t AbsDiff = FABS(locDom.e(j*nx+k)-locDom.e(k*nx+j));
- TotalAbsDiff += AbsDiff;
-
- if (MaxAbsDiff <AbsDiff) MaxAbsDiff = AbsDiff;
-
- Real_t RelDiff = AbsDiff / locDom.e(k*nx+j);
-
- if (MaxRelDiff <RelDiff) MaxRelDiff = RelDiff;
- }
- }
-
- // Quick symmetry check
- std::cout << " Testing Plane 0 of Energy Array on rank 0:\n";
- std::cout << " MaxAbsDiff = " << std::setw(12) << MaxAbsDiff << "\n";
- std::cout << " TotalAbsDiff = " << std::setw(12) << TotalAbsDiff << "\n";
- std::cout << " MaxRelDiff = " << std::setw(12) << MaxRelDiff << "\n";
-
- // Timing information
- std::cout.unsetf(std::ios_base::floatfield);
- std::cout << std::setprecision(2);
- std::cout << "\nElapsed time = " << std::setw(10) << elapsed_time << " (s)\n";
- std::cout << std::setprecision(8);
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- std::cout << "FOM = " << std::setw(10) << 1000.0/grindTime2 << " (z/s)\n\n";
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- return ;
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diff --git a/test/4_Lulesh/lulesh-viz.mini.cc b/test/4_Lulesh/lulesh-viz.mini.cc
deleted file mode 100644
index 5579d7b..0000000
--- a/test/4_Lulesh/lulesh-viz.mini.cc
+++ /dev/null
@@ -1,12 +0,0 @@
-#include "stdio.h"
-#include "string.h"
-#include "stdlib.h"
-#include "math.h"
-#include "lulesh.h"
-void DumpToVisit(Domain& domain, int numFiles, int myRank, int numRanks)
-{
- if (myRank == 0) {
- printf("Must enable -DVIZ_MESH at compile time to call DumpDomain\n");
- }
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deleted file mode 100644
index b7eeba6..0000000
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-#include "vector"
-#include "math.h"
-#include "stdio.h"
-#include "string.h"
-#include "ctype.h"
-#include "time.h"
-#include "sys/time.h"
-#include "iostream"
-#include "unistd.h"
-#include "lulesh.h"
-static inline
-void TimeIncrement(Domain& domain)
-{
- Real_t targetdt = domain.stoptime() - domain.time() ;
-
- if ((domain.dtfixed() <= Real_t(0.0)) && (domain.cycle() != Int_t(0))) {
- Real_t ratio ;
- Real_t olddt = domain.deltatime() ;
-
- /* This will require a reduction in parallel */
- Real_t gnewdt = Real_t(1.0e+20) ;
- Real_t newdt ;
- if (domain.dtcourant() < gnewdt) {
- gnewdt = domain.dtcourant() / Real_t(2.0) ;
- }
- if (domain.dthydro() < gnewdt) {
- gnewdt = domain.dthydro() * Real_t(2.0) / Real_t(3.0) ;
- }
-
-#if USE_MPI
- MPI_Allreduce(&gnewdt, &newdt, 1,
- ((sizeof(Real_t) == 4) ? MPI_FLOAT : MPI_DOUBLE),
- MPI_MIN, MPI_COMM_WORLD) ;
-#else
- newdt = gnewdt;
-#endif
-
- ratio = newdt / olddt ;
- if (ratio >= Real_t(1.0)) {
- if (ratio < domain.deltatimemultlb()) {
- newdt = olddt ;
- }
- else if (ratio > domain.deltatimemultub()) {
- newdt = olddt*domain.deltatimemultub() ;
- }
- }
-
- if (newdt > domain.dtmax()) {
- newdt = domain.dtmax() ;
- }
- domain.deltatime() = newdt ;
- }
-
- /* TRY TO PREVENT VERY SMALL SCALING ON THE NEXT CYCLE */
- if ((targetdt > domain.deltatime()) &&
- (targetdt < (Real_t(4.0) * domain.deltatime() / Real_t(3.0))) ) {
- targetdt = Real_t(2.0) * domain.deltatime() / Real_t(3.0) ;
- }
-
- if (targetdt < domain.deltatime()) {
- domain.deltatime() = targetdt ;
- }
-
- domain.time() += domain.deltatime() ;
-
- ++domain.cycle() ;
-}
-static inline
-void CollectDomainNodesToElemNodes(Domain &domain,
- const Index_t* elemToNode,
- Real_t elemX[8],
- Real_t elemY[8],
- Real_t elemZ[8])
-{
- Index_t nd0i = elemToNode[0] ;
- Index_t nd1i = elemToNode[1] ;
- Index_t nd2i = elemToNode[2] ;
- Index_t nd3i = elemToNode[3] ;
- Index_t nd4i = elemToNode[4] ;
- Index_t nd5i = elemToNode[5] ;
- Index_t nd6i = elemToNode[6] ;
- Index_t nd7i = elemToNode[7] ;
-
- elemX[0] = domain.x(nd0i);
- elemX[1] = domain.x(nd1i);
- elemX[2] = domain.x(nd2i);
- elemX[3] = domain.x(nd3i);
- elemX[4] = domain.x(nd4i);
- elemX[5] = domain.x(nd5i);
- elemX[6] = domain.x(nd6i);
- elemX[7] = domain.x(nd7i);
-
- elemY[0] = domain.y(nd0i);
- elemY[1] = domain.y(nd1i);
- elemY[2] = domain.y(nd2i);
- elemY[3] = domain.y(nd3i);
- elemY[4] = domain.y(nd4i);
- elemY[5] = domain.y(nd5i);
- elemY[6] = domain.y(nd6i);
- elemY[7] = domain.y(nd7i);
-
- elemZ[0] = domain.z(nd0i);
- elemZ[1] = domain.z(nd1i);
- elemZ[2] = domain.z(nd2i);
- elemZ[3] = domain.z(nd3i);
- elemZ[4] = domain.z(nd4i);
- elemZ[5] = domain.z(nd5i);
- elemZ[6] = domain.z(nd6i);
- elemZ[7] = domain.z(nd7i);
-
-}
-static inline
-void InitStressTermsForElems(Domain &domain,
- Real_t *sigxx, Real_t *sigyy, Real_t *sigzz,
- Index_t numElem)
-{
- //
- // pull in the stresses appropriate to the hydro integration
- //
-
-#pragma omp parallel for firstprivate(numElem)
- for (Index_t i = 0 ; i < numElem ; ++i){
- sigxx[i] = sigyy[i] = sigzz[i] = - domain.p(i) - domain.q(i) ;
- }
-}
-static inline
-void CalcElemShapeFunctionDerivatives( Real_t const x[],
- Real_t const y[],
- Real_t const z[],
- Real_t b[][8],
- Real_t* const volume )
-{
- const Real_t x0 = x[0] ; const Real_t x1 = x[1] ;
- const Real_t x2 = x[2] ; const Real_t x3 = x[3] ;
- const Real_t x4 = x[4] ; const Real_t x5 = x[5] ;
- const Real_t x6 = x[6] ; const Real_t x7 = x[7] ;
-
- const Real_t y0 = y[0] ; const Real_t y1 = y[1] ;
- const Real_t y2 = y[2] ; const Real_t y3 = y[3] ;
- const Real_t y4 = y[4] ; const Real_t y5 = y[5] ;
- const Real_t y6 = y[6] ; const Real_t y7 = y[7] ;
-
- const Real_t z0 = z[0] ; const Real_t z1 = z[1] ;
- const Real_t z2 = z[2] ; const Real_t z3 = z[3] ;
- const Real_t z4 = z[4] ; const Real_t z5 = z[5] ;
- const Real_t z6 = z[6] ; const Real_t z7 = z[7] ;
-
- Real_t fjxxi, fjxet, fjxze;
- Real_t fjyxi, fjyet, fjyze;
- Real_t fjzxi, fjzet, fjzze;
- Real_t cjxxi, cjxet, cjxze;
- Real_t cjyxi, cjyet, cjyze;
- Real_t cjzxi, cjzet, cjzze;
-
- fjxxi = Real_t(.125) * ( (x6-x0) + (x5-x3) - (x7-x1) - (x4-x2) );
- fjxet = Real_t(.125) * ( (x6-x0) - (x5-x3) + (x7-x1) - (x4-x2) );
- fjxze = Real_t(.125) * ( (x6-x0) + (x5-x3) + (x7-x1) + (x4-x2) );
-
- fjyxi = Real_t(.125) * ( (y6-y0) + (y5-y3) - (y7-y1) - (y4-y2) );
- fjyet = Real_t(.125) * ( (y6-y0) - (y5-y3) + (y7-y1) - (y4-y2) );
- fjyze = Real_t(.125) * ( (y6-y0) + (y5-y3) + (y7-y1) + (y4-y2) );
-
- fjzxi = Real_t(.125) * ( (z6-z0) + (z5-z3) - (z7-z1) - (z4-z2) );
- fjzet = Real_t(.125) * ( (z6-z0) - (z5-z3) + (z7-z1) - (z4-z2) );
- fjzze = Real_t(.125) * ( (z6-z0) + (z5-z3) + (z7-z1) + (z4-z2) );
-
- /* compute cofactors */
- cjxxi = (fjyet * fjzze) - (fjzet * fjyze);
- cjxet = - (fjyxi * fjzze) + (fjzxi * fjyze);
- cjxze = (fjyxi * fjzet) - (fjzxi * fjyet);
-
- cjyxi = - (fjxet * fjzze) + (fjzet * fjxze);
- cjyet = (fjxxi * fjzze) - (fjzxi * fjxze);
- cjyze = - (fjxxi * fjzet) + (fjzxi * fjxet);
-
- cjzxi = (fjxet * fjyze) - (fjyet * fjxze);
- cjzet = - (fjxxi * fjyze) + (fjyxi * fjxze);
- cjzze = (fjxxi * fjyet) - (fjyxi * fjxet);
-
- /* calculate partials :
- this need only be done for l = 0,1,2,3 since , by symmetry ,
- (6,7,4,5) = - (0,1,2,3) .
- */
- b[0][0] = - cjxxi - cjxet - cjxze;
- b[0][1] = cjxxi - cjxet - cjxze;
- b[0][2] = cjxxi + cjxet - cjxze;
- b[0][3] = - cjxxi + cjxet - cjxze;
- b[0][4] = -b[0][2];
- b[0][5] = -b[0][3];
- b[0][6] = -b[0][0];
- b[0][7] = -b[0][1];
-
- b[1][0] = - cjyxi - cjyet - cjyze;
- b[1][1] = cjyxi - cjyet - cjyze;
- b[1][2] = cjyxi + cjyet - cjyze;
- b[1][3] = - cjyxi + cjyet - cjyze;
- b[1][4] = -b[1][2];
- b[1][5] = -b[1][3];
- b[1][6] = -b[1][0];
- b[1][7] = -b[1][1];
-
- b[2][0] = - cjzxi - cjzet - cjzze;
- b[2][1] = cjzxi - cjzet - cjzze;
- b[2][2] = cjzxi + cjzet - cjzze;
- b[2][3] = - cjzxi + cjzet - cjzze;
- b[2][4] = -b[2][2];
- b[2][5] = -b[2][3];
- b[2][6] = -b[2][0];
- b[2][7] = -b[2][1];
-
- /* calculate jacobian determinant (volume) */
- *volume = Real_t(8.) * ( fjxet * cjxet + fjyet * cjyet + fjzet * cjzet);
-}
-static inline
-void SumElemFaceNormal(Real_t *normalX0, Real_t *normalY0, Real_t *normalZ0,
- Real_t *normalX1, Real_t *normalY1, Real_t *normalZ1,
- Real_t *normalX2, Real_t *normalY2, Real_t *normalZ2,
- Real_t *normalX3, Real_t *normalY3, Real_t *normalZ3,
- const Real_t x0, const Real_t y0, const Real_t z0,
- const Real_t x1, const Real_t y1, const Real_t z1,
- const Real_t x2, const Real_t y2, const Real_t z2,
- const Real_t x3, const Real_t y3, const Real_t z3)
-{
- Real_t bisectX0 = Real_t(0.5) * (x3 + x2 - x1 - x0);
- Real_t bisectY0 = Real_t(0.5) * (y3 + y2 - y1 - y0);
- Real_t bisectZ0 = Real_t(0.5) * (z3 + z2 - z1 - z0);
- Real_t bisectX1 = Real_t(0.5) * (x2 + x1 - x3 - x0);
- Real_t bisectY1 = Real_t(0.5) * (y2 + y1 - y3 - y0);
- Real_t bisectZ1 = Real_t(0.5) * (z2 + z1 - z3 - z0);
- Real_t areaX = Real_t(0.25) * (bisectY0 * bisectZ1 - bisectZ0 * bisectY1);
- Real_t areaY = Real_t(0.25) * (bisectZ0 * bisectX1 - bisectX0 * bisectZ1);
- Real_t areaZ = Real_t(0.25) * (bisectX0 * bisectY1 - bisectY0 * bisectX1);
-
- *normalX0 += areaX;
- *normalX1 += areaX;
- *normalX2 += areaX;
- *normalX3 += areaX;
-
- *normalY0 += areaY;
- *normalY1 += areaY;
- *normalY2 += areaY;
- *normalY3 += areaY;
-
- *normalZ0 += areaZ;
- *normalZ1 += areaZ;
- *normalZ2 += areaZ;
- *normalZ3 += areaZ;
-}
-static inline
-void CalcElemNodeNormals(Real_t pfx[8],
- Real_t pfy[8],
- Real_t pfz[8],
- const Real_t x[8],
- const Real_t y[8],
- const Real_t z[8])
-{
- for (Index_t i = 0 ; i < 8 ; ++i) {
- pfx[i] = Real_t(0.0);
- pfy[i] = Real_t(0.0);
- pfz[i] = Real_t(0.0);
- }
- /* evaluate face one: nodes 0, 1, 2, 3 */
- SumElemFaceNormal(&pfx[0], &pfy[0], &pfz[0],
- &pfx[1], &pfy[1], &pfz[1],
- &pfx[2], &pfy[2], &pfz[2],
- &pfx[3], &pfy[3], &pfz[3],
- x[0], y[0], z[0], x[1], y[1], z[1],
- x[2], y[2], z[2], x[3], y[3], z[3]);
- /* evaluate face two: nodes 0, 4, 5, 1 */
- SumElemFaceNormal(&pfx[0], &pfy[0], &pfz[0],
- &pfx[4], &pfy[4], &pfz[4],
- &pfx[5], &pfy[5], &pfz[5],
- &pfx[1], &pfy[1], &pfz[1],
- x[0], y[0], z[0], x[4], y[4], z[4],
- x[5], y[5], z[5], x[1], y[1], z[1]);
- /* evaluate face three: nodes 1, 5, 6, 2 */
- SumElemFaceNormal(&pfx[1], &pfy[1], &pfz[1],
- &pfx[5], &pfy[5], &pfz[5],
- &pfx[6], &pfy[6], &pfz[6],
- &pfx[2], &pfy[2], &pfz[2],
- x[1], y[1], z[1], x[5], y[5], z[5],
- x[6], y[6], z[6], x[2], y[2], z[2]);
- /* evaluate face four: nodes 2, 6, 7, 3 */
- SumElemFaceNormal(&pfx[2], &pfy[2], &pfz[2],
- &pfx[6], &pfy[6], &pfz[6],
- &pfx[7], &pfy[7], &pfz[7],
- &pfx[3], &pfy[3], &pfz[3],
- x[2], y[2], z[2], x[6], y[6], z[6],
- x[7], y[7], z[7], x[3], y[3], z[3]);
- /* evaluate face five: nodes 3, 7, 4, 0 */
- SumElemFaceNormal(&pfx[3], &pfy[3], &pfz[3],
- &pfx[7], &pfy[7], &pfz[7],
- &pfx[4], &pfy[4], &pfz[4],
- &pfx[0], &pfy[0], &pfz[0],
- x[3], y[3], z[3], x[7], y[7], z[7],
- x[4], y[4], z[4], x[0], y[0], z[0]);
- /* evaluate face six: nodes 4, 7, 6, 5 */
- SumElemFaceNormal(&pfx[4], &pfy[4], &pfz[4],
- &pfx[7], &pfy[7], &pfz[7],
- &pfx[6], &pfy[6], &pfz[6],
- &pfx[5], &pfy[5], &pfz[5],
- x[4], y[4], z[4], x[7], y[7], z[7],
- x[6], y[6], z[6], x[5], y[5], z[5]);
-}
-static inline
-void SumElemStressesToNodeForces( const Real_t B[][8],
- const Real_t stress_xx,
- const Real_t stress_yy,
- const Real_t stress_zz,
- Real_t fx[], Real_t fy[], Real_t fz[] )
-{
- for(Index_t i = 0; i < 8; i++) {
- fx[i] = -( stress_xx * B[0][i] );
- fy[i] = -( stress_yy * B[1][i] );
- fz[i] = -( stress_zz * B[2][i] );
- }
-}
-static inline
-void IntegrateStressForElems( Domain &domain,
- Real_t *sigxx, Real_t *sigyy, Real_t *sigzz,
- Real_t *determ, Index_t numElem, Index_t numNode)
-{
-#if _OPENMP
- Index_t numthreads = omp_get_max_threads();
-#else
- Index_t numthreads = 1;
-#endif
-
- Index_t numElem8 = numElem * 8 ;
- Real_t *fx_elem;
- Real_t *fy_elem;
- Real_t *fz_elem;
- Real_t fx_local[8] ;
- Real_t fy_local[8] ;
- Real_t fz_local[8] ;
-
-
- if (numthreads > 1) {
- fx_elem = Allocate<Real_t>(numElem8) ;
- fy_elem = Allocate<Real_t>(numElem8) ;
- fz_elem = Allocate<Real_t>(numElem8) ;
- }
- // loop over all elements
-
-#pragma omp parallel for firstprivate(numElem)
- for( Index_t k=0 ; k<numElem ; ++k )
- {
- const Index_t* const elemToNode = domain.nodelist(k);
- Real_t B[3][8] ;// shape function derivatives
- Real_t x_local[8] ;
- Real_t y_local[8] ;
- Real_t z_local[8] ;
-
- // get nodal coordinates from global arrays and copy into local arrays.
- CollectDomainNodesToElemNodes(domain, elemToNode, x_local, y_local, z_local);
-
- // Volume calculation involves extra work for numerical consistency
- CalcElemShapeFunctionDerivatives(x_local, y_local, z_local,
- B, &determ[k]);
-
- CalcElemNodeNormals( B[0] , B[1], B[2],
- x_local, y_local, z_local );
-
- if (numthreads > 1) {
- // Eliminate thread writing conflicts at the nodes by giving
- // each element its own copy to write to
- SumElemStressesToNodeForces( B, sigxx[k], sigyy[k], sigzz[k],
- &fx_elem[k*8],
- &fy_elem[k*8],
- &fz_elem[k*8] ) ;
- }
- else {
- SumElemStressesToNodeForces( B, sigxx[k], sigyy[k], sigzz[k],
- fx_local, fy_local, fz_local ) ;
-
- // copy nodal force contributions to global force arrray.
- for( Index_t lnode=0 ; lnode<8 ; ++lnode ) {
- Index_t gnode = elemToNode[lnode];
- domain.fx(gnode) += fx_local[lnode];
- domain.fy(gnode) += fy_local[lnode];
- domain.fz(gnode) += fz_local[lnode];
- }
- }
- }
-
- if (numthreads > 1) {
- // If threaded, then we need to copy the data out of the temporary
- // arrays used above into the final forces field
-#pragma omp parallel for firstprivate(numNode)
- for( Index_t gnode=0 ; gnode<numNode ; ++gnode )
- {
- Index_t count = domain.nodeElemCount(gnode) ;
- Index_t *cornerList = domain.nodeElemCornerList(gnode) ;
- Real_t fx_tmp = Real_t(0.0) ;
- Real_t fy_tmp = Real_t(0.0) ;
- Real_t fz_tmp = Real_t(0.0) ;
- for (Index_t i=0 ; i < count ; ++i) {
- Index_t ielem = cornerList[i] ;
- fx_tmp += fx_elem[ielem] ;
- fy_tmp += fy_elem[ielem] ;
- fz_tmp += fz_elem[ielem] ;
- }
- domain.fx(gnode) = fx_tmp ;
- domain.fy(gnode) = fy_tmp ;
- domain.fz(gnode) = fz_tmp ;
- }
- Release(&fz_elem) ;
- Release(&fy_elem) ;
- Release(&fx_elem) ;
- }
-}
-static inline
-void VoluDer(const Real_t x0, const Real_t x1, const Real_t x2,
- const Real_t x3, const Real_t x4, const Real_t x5,
- const Real_t y0, const Real_t y1, const Real_t y2,
- const Real_t y3, const Real_t y4, const Real_t y5,
- const Real_t z0, const Real_t z1, const Real_t z2,
- const Real_t z3, const Real_t z4, const Real_t z5,
- Real_t* dvdx, Real_t* dvdy, Real_t* dvdz)
-{
- const Real_t twelfth = Real_t(1.0) / Real_t(12.0) ;
-
- *dvdx =
- (y1 + y2) * (z0 + z1) - (y0 + y1) * (z1 + z2) +
- (y0 + y4) * (z3 + z4) - (y3 + y4) * (z0 + z4) -
- (y2 + y5) * (z3 + z5) + (y3 + y5) * (z2 + z5);
- *dvdy =
- - (x1 + x2) * (z0 + z1) + (x0 + x1) * (z1 + z2) -
- (x0 + x4) * (z3 + z4) + (x3 + x4) * (z0 + z4) +
- (x2 + x5) * (z3 + z5) - (x3 + x5) * (z2 + z5);
-
- *dvdz =
- - (y1 + y2) * (x0 + x1) + (y0 + y1) * (x1 + x2) -
- (y0 + y4) * (x3 + x4) + (y3 + y4) * (x0 + x4) +
- (y2 + y5) * (x3 + x5) - (y3 + y5) * (x2 + x5);
-
- *dvdx *= twelfth;
- *dvdy *= twelfth;
- *dvdz *= twelfth;
-}
-static inline
-void CalcElemVolumeDerivative(Real_t dvdx[8],
- Real_t dvdy[8],
- Real_t dvdz[8],
- const Real_t x[8],
- const Real_t y[8],
- const Real_t z[8])
-{
- VoluDer(x[1], x[2], x[3], x[4], x[5], x[7],
- y[1], y[2], y[3], y[4], y[5], y[7],
- z[1], z[2], z[3], z[4], z[5], z[7],
- &dvdx[0], &dvdy[0], &dvdz[0]);
- VoluDer(x[0], x[1], x[2], x[7], x[4], x[6],
- y[0], y[1], y[2], y[7], y[4], y[6],
- z[0], z[1], z[2], z[7], z[4], z[6],
- &dvdx[3], &dvdy[3], &dvdz[3]);
- VoluDer(x[3], x[0], x[1], x[6], x[7], x[5],
- y[3], y[0], y[1], y[6], y[7], y[5],
- z[3], z[0], z[1], z[6], z[7], z[5],
- &dvdx[2], &dvdy[2], &dvdz[2]);
- VoluDer(x[2], x[3], x[0], x[5], x[6], x[4],
- y[2], y[3], y[0], y[5], y[6], y[4],
- z[2], z[3], z[0], z[5], z[6], z[4],
- &dvdx[1], &dvdy[1], &dvdz[1]);
- VoluDer(x[7], x[6], x[5], x[0], x[3], x[1],
- y[7], y[6], y[5], y[0], y[3], y[1],
- z[7], z[6], z[5], z[0], z[3], z[1],
- &dvdx[4], &dvdy[4], &dvdz[4]);
- VoluDer(x[4], x[7], x[6], x[1], x[0], x[2],
- y[4], y[7], y[6], y[1], y[0], y[2],
- z[4], z[7], z[6], z[1], z[0], z[2],
- &dvdx[5], &dvdy[5], &dvdz[5]);
- VoluDer(x[5], x[4], x[7], x[2], x[1], x[3],
- y[5], y[4], y[7], y[2], y[1], y[3],
- z[5], z[4], z[7], z[2], z[1], z[3],
- &dvdx[6], &dvdy[6], &dvdz[6]);
- VoluDer(x[6], x[5], x[4], x[3], x[2], x[0],
- y[6], y[5], y[4], y[3], y[2], y[0],
- z[6], z[5], z[4], z[3], z[2], z[0],
- &dvdx[7], &dvdy[7], &dvdz[7]);
-}
-static inline
-void CalcElemFBHourglassForce(Real_t *xd, Real_t *yd, Real_t *zd, Real_t hourgam[][4],
- Real_t coefficient,
- Real_t *hgfx, Real_t *hgfy, Real_t *hgfz )
-{
- Real_t hxx[4];
- for(Index_t i = 0; i < 4; i++) {
- hxx[i] = hourgam[0][i] * xd[0] + hourgam[1][i] * xd[1] +
- hourgam[2][i] * xd[2] + hourgam[3][i] * xd[3] +
- hourgam[4][i] * xd[4] + hourgam[5][i] * xd[5] +
- hourgam[6][i] * xd[6] + hourgam[7][i] * xd[7];
- }
- for(Index_t i = 0; i < 8; i++) {
- hgfx[i] = coefficient *
- (hourgam[i][0] * hxx[0] + hourgam[i][1] * hxx[1] +
- hourgam[i][2] * hxx[2] + hourgam[i][3] * hxx[3]);
- }
- for(Index_t i = 0; i < 4; i++) {
- hxx[i] = hourgam[0][i] * yd[0] + hourgam[1][i] * yd[1] +
- hourgam[2][i] * yd[2] + hourgam[3][i] * yd[3] +
- hourgam[4][i] * yd[4] + hourgam[5][i] * yd[5] +
- hourgam[6][i] * yd[6] + hourgam[7][i] * yd[7];
- }
- for(Index_t i = 0; i < 8; i++) {
- hgfy[i] = coefficient *
- (hourgam[i][0] * hxx[0] + hourgam[i][1] * hxx[1] +
- hourgam[i][2] * hxx[2] + hourgam[i][3] * hxx[3]);
- }
- for(Index_t i = 0; i < 4; i++) {
- hxx[i] = hourgam[0][i] * zd[0] + hourgam[1][i] * zd[1] +
- hourgam[2][i] * zd[2] + hourgam[3][i] * zd[3] +
- hourgam[4][i] * zd[4] + hourgam[5][i] * zd[5] +
- hourgam[6][i] * zd[6] + hourgam[7][i] * zd[7];
- }
- for(Index_t i = 0; i < 8; i++) {
- hgfz[i] = coefficient *
- (hourgam[i][0] * hxx[0] + hourgam[i][1] * hxx[1] +
- hourgam[i][2] * hxx[2] + hourgam[i][3] * hxx[3]);
- }
-}
-static inline
-void CalcFBHourglassForceForElems( Domain &domain,
- Real_t *determ,
- Real_t *x8n, Real_t *y8n, Real_t *z8n,
- Real_t *dvdx, Real_t *dvdy, Real_t *dvdz,
- Real_t hourg, Index_t numElem,
- Index_t numNode)
-{
-
-#if _OPENMP
- Index_t numthreads = omp_get_max_threads();
-#else
- Index_t numthreads = 1;
-#endif
- /*************************************************
- *
- * FUNCTION: Calculates the Flanagan-Belytschko anti-hourglass
- * force.
- *
- *************************************************/
-
- Index_t numElem8 = numElem * 8 ;
-
- Real_t *fx_elem;
- Real_t *fy_elem;
- Real_t *fz_elem;
-
- if(numthreads > 1) {
- fx_elem = Allocate<Real_t>(numElem8) ;
- fy_elem = Allocate<Real_t>(numElem8) ;
- fz_elem = Allocate<Real_t>(numElem8) ;
- }
-
- Real_t gamma[4][8];
-
- gamma[0][0] = Real_t( 1.);
- gamma[0][1] = Real_t( 1.);
- gamma[0][2] = Real_t(-1.);
- gamma[0][3] = Real_t(-1.);
- gamma[0][4] = Real_t(-1.);
- gamma[0][5] = Real_t(-1.);
- gamma[0][6] = Real_t( 1.);
- gamma[0][7] = Real_t( 1.);
- gamma[1][0] = Real_t( 1.);
- gamma[1][1] = Real_t(-1.);
- gamma[1][2] = Real_t(-1.);
- gamma[1][3] = Real_t( 1.);
- gamma[1][4] = Real_t(-1.);
- gamma[1][5] = Real_t( 1.);
- gamma[1][6] = Real_t( 1.);
- gamma[1][7] = Real_t(-1.);
- gamma[2][0] = Real_t( 1.);
- gamma[2][1] = Real_t(-1.);
- gamma[2][2] = Real_t( 1.);
- gamma[2][3] = Real_t(-1.);
- gamma[2][4] = Real_t( 1.);
- gamma[2][5] = Real_t(-1.);
- gamma[2][6] = Real_t( 1.);
- gamma[2][7] = Real_t(-1.);
- gamma[3][0] = Real_t(-1.);
- gamma[3][1] = Real_t( 1.);
- gamma[3][2] = Real_t(-1.);
- gamma[3][3] = Real_t( 1.);
- gamma[3][4] = Real_t( 1.);
- gamma[3][5] = Real_t(-1.);
- gamma[3][6] = Real_t( 1.);
- gamma[3][7] = Real_t(-1.);
-
-/*************************************************/
-/* compute the hourglass modes */
-
-
-#pragma omp parallel for firstprivate(numElem, hourg)
- for(Index_t i2=0;i2<numElem;++i2){
- Real_t *fx_local, *fy_local, *fz_local ;
- Real_t hgfx[8], hgfy[8], hgfz[8] ;
-
- Real_t coefficient;
-
- Real_t hourgam[8][4];
- Real_t xd1[8], yd1[8], zd1[8] ;
-
- const Index_t *elemToNode = domain.nodelist(i2);
- Index_t i3=8*i2;
- Real_t volinv=Real_t(1.0)/determ[i2];
- Real_t ss1, mass1, volume13 ;
- for(Index_t i1=0;i1<4;++i1){
-
- Real_t hourmodx =
- x8n[i3] * gamma[i1][0] + x8n[i3+1] * gamma[i1][1] +
- x8n[i3+2] * gamma[i1][2] + x8n[i3+3] * gamma[i1][3] +
- x8n[i3+4] * gamma[i1][4] + x8n[i3+5] * gamma[i1][5] +
- x8n[i3+6] * gamma[i1][6] + x8n[i3+7] * gamma[i1][7];
-
- Real_t hourmody =
- y8n[i3] * gamma[i1][0] + y8n[i3+1] * gamma[i1][1] +
- y8n[i3+2] * gamma[i1][2] + y8n[i3+3] * gamma[i1][3] +
- y8n[i3+4] * gamma[i1][4] + y8n[i3+5] * gamma[i1][5] +
- y8n[i3+6] * gamma[i1][6] + y8n[i3+7] * gamma[i1][7];
-
- Real_t hourmodz =
- z8n[i3] * gamma[i1][0] + z8n[i3+1] * gamma[i1][1] +
- z8n[i3+2] * gamma[i1][2] + z8n[i3+3] * gamma[i1][3] +
- z8n[i3+4] * gamma[i1][4] + z8n[i3+5] * gamma[i1][5] +
- z8n[i3+6] * gamma[i1][6] + z8n[i3+7] * gamma[i1][7];
-
- hourgam[0][i1] = gamma[i1][0] - volinv*(dvdx[i3 ] * hourmodx +
- dvdy[i3 ] * hourmody +
- dvdz[i3 ] * hourmodz );
-
- hourgam[1][i1] = gamma[i1][1] - volinv*(dvdx[i3+1] * hourmodx +
- dvdy[i3+1] * hourmody +
- dvdz[i3+1] * hourmodz );
-
- hourgam[2][i1] = gamma[i1][2] - volinv*(dvdx[i3+2] * hourmodx +
- dvdy[i3+2] * hourmody +
- dvdz[i3+2] * hourmodz );
-
- hourgam[3][i1] = gamma[i1][3] - volinv*(dvdx[i3+3] * hourmodx +
- dvdy[i3+3] * hourmody +
- dvdz[i3+3] * hourmodz );
-
- hourgam[4][i1] = gamma[i1][4] - volinv*(dvdx[i3+4] * hourmodx +
- dvdy[i3+4] * hourmody +
- dvdz[i3+4] * hourmodz );
-
- hourgam[5][i1] = gamma[i1][5] - volinv*(dvdx[i3+5] * hourmodx +
- dvdy[i3+5] * hourmody +
- dvdz[i3+5] * hourmodz );
-
- hourgam[6][i1] = gamma[i1][6] - volinv*(dvdx[i3+6] * hourmodx +
- dvdy[i3+6] * hourmody +
- dvdz[i3+6] * hourmodz );
-
- hourgam[7][i1] = gamma[i1][7] - volinv*(dvdx[i3+7] * hourmodx +
- dvdy[i3+7] * hourmody +
- dvdz[i3+7] * hourmodz );
-
- }
-
- /* compute forces */
- /* store forces into h arrays (force arrays) */
-
- ss1=domain.ss(i2);
- mass1=domain.elemMass(i2);
- volume13=CBRT(determ[i2]);
-
- Index_t n0si2 = elemToNode[0];
- Index_t n1si2 = elemToNode[1];
- Index_t n2si2 = elemToNode[2];
- Index_t n3si2 = elemToNode[3];
- Index_t n4si2 = elemToNode[4];
- Index_t n5si2 = elemToNode[5];
- Index_t n6si2 = elemToNode[6];
- Index_t n7si2 = elemToNode[7];
-
- xd1[0] = domain.xd(n0si2);
- xd1[1] = domain.xd(n1si2);
- xd1[2] = domain.xd(n2si2);
- xd1[3] = domain.xd(n3si2);
- xd1[4] = domain.xd(n4si2);
- xd1[5] = domain.xd(n5si2);
- xd1[6] = domain.xd(n6si2);
- xd1[7] = domain.xd(n7si2);
-
- yd1[0] = domain.yd(n0si2);
- yd1[1] = domain.yd(n1si2);
- yd1[2] = domain.yd(n2si2);
- yd1[3] = domain.yd(n3si2);
- yd1[4] = domain.yd(n4si2);
- yd1[5] = domain.yd(n5si2);
- yd1[6] = domain.yd(n6si2);
- yd1[7] = domain.yd(n7si2);
-
- zd1[0] = domain.zd(n0si2);
- zd1[1] = domain.zd(n1si2);
- zd1[2] = domain.zd(n2si2);
- zd1[3] = domain.zd(n3si2);
- zd1[4] = domain.zd(n4si2);
- zd1[5] = domain.zd(n5si2);
- zd1[6] = domain.zd(n6si2);
- zd1[7] = domain.zd(n7si2);
-
- coefficient = - hourg * Real_t(0.01) * ss1 * mass1 / volume13;
-
- CalcElemFBHourglassForce(xd1,yd1,zd1,
- hourgam,
- coefficient, hgfx, hgfy, hgfz);
-
- // With the threaded version, we write into local arrays per elem
- // so we don't have to worry about race conditions
- if (numthreads > 1) {
- fx_local = &fx_elem[i3] ;
- fx_local[0] = hgfx[0];
- fx_local[1] = hgfx[1];
- fx_local[2] = hgfx[2];
- fx_local[3] = hgfx[3];
- fx_local[4] = hgfx[4];
- fx_local[5] = hgfx[5];
- fx_local[6] = hgfx[6];
- fx_local[7] = hgfx[7];
-
- fy_local = &fy_elem[i3] ;
- fy_local[0] = hgfy[0];
- fy_local[1] = hgfy[1];
- fy_local[2] = hgfy[2];
- fy_local[3] = hgfy[3];
- fy_local[4] = hgfy[4];
- fy_local[5] = hgfy[5];
- fy_local[6] = hgfy[6];
- fy_local[7] = hgfy[7];
-
- fz_local = &fz_elem[i3] ;
- fz_local[0] = hgfz[0];
- fz_local[1] = hgfz[1];
- fz_local[2] = hgfz[2];
- fz_local[3] = hgfz[3];
- fz_local[4] = hgfz[4];
- fz_local[5] = hgfz[5];
- fz_local[6] = hgfz[6];
- fz_local[7] = hgfz[7];
- }
- else {
- domain.fx(n0si2) += hgfx[0];
- domain.fy(n0si2) += hgfy[0];
- domain.fz(n0si2) += hgfz[0];
-
- domain.fx(n1si2) += hgfx[1];
- domain.fy(n1si2) += hgfy[1];
- domain.fz(n1si2) += hgfz[1];
-
- domain.fx(n2si2) += hgfx[2];
- domain.fy(n2si2) += hgfy[2];
- domain.fz(n2si2) += hgfz[2];
-
- domain.fx(n3si2) += hgfx[3];
- domain.fy(n3si2) += hgfy[3];
- domain.fz(n3si2) += hgfz[3];
-
- domain.fx(n4si2) += hgfx[4];
- domain.fy(n4si2) += hgfy[4];
- domain.fz(n4si2) += hgfz[4];
-
- domain.fx(n5si2) += hgfx[5];
- domain.fy(n5si2) += hgfy[5];
- domain.fz(n5si2) += hgfz[5];
-
- domain.fx(n6si2) += hgfx[6];
- domain.fy(n6si2) += hgfy[6];
- domain.fz(n6si2) += hgfz[6];
-
- domain.fx(n7si2) += hgfx[7];
- domain.fy(n7si2) += hgfy[7];
- domain.fz(n7si2) += hgfz[7];
- }
- }
-
- if (numthreads > 1) {
- // Collect the data from the local arrays into the final force arrays
-#pragma omp parallel for firstprivate(numNode)
- for( Index_t gnode=0 ; gnode<numNode ; ++gnode )
- {
- Index_t count = domain.nodeElemCount(gnode) ;
- Index_t *cornerList = domain.nodeElemCornerList(gnode) ;
- Real_t fx_tmp = Real_t(0.0) ;
- Real_t fy_tmp = Real_t(0.0) ;
- Real_t fz_tmp = Real_t(0.0) ;
- for (Index_t i=0 ; i < count ; ++i) {
- Index_t ielem = cornerList[i] ;
- fx_tmp += fx_elem[ielem] ;
- fy_tmp += fy_elem[ielem] ;
- fz_tmp += fz_elem[ielem] ;
- }
- domain.fx(gnode) += fx_tmp ;
- domain.fy(gnode) += fy_tmp ;
- domain.fz(gnode) += fz_tmp ;
- }
- Release(&fz_elem) ;
- Release(&fy_elem) ;
- Release(&fx_elem) ;
- }
-}
-static inline
-void CalcHourglassControlForElems(Domain& domain,
- Real_t determ[], Real_t hgcoef)
-{
- Index_t numElem = domain.numElem() ;
- Index_t numElem8 = numElem * 8 ;
- Real_t *dvdx = Allocate<Real_t>(numElem8) ;
- Real_t *dvdy = Allocate<Real_t>(numElem8) ;
- Real_t *dvdz = Allocate<Real_t>(numElem8) ;
- Real_t *x8n = Allocate<Real_t>(numElem8) ;
- Real_t *y8n = Allocate<Real_t>(numElem8) ;
- Real_t *z8n = Allocate<Real_t>(numElem8) ;
-
- /* start loop over elements */
-#pragma omp parallel for firstprivate(numElem)
- for (Index_t i=0 ; i<numElem ; ++i){
- Real_t x1[8], y1[8], z1[8] ;
- Real_t pfx[8], pfy[8], pfz[8] ;
-
- Index_t* elemToNode = domain.nodelist(i);
- CollectDomainNodesToElemNodes(domain, elemToNode, x1, y1, z1);
-
- CalcElemVolumeDerivative(pfx, pfy, pfz, x1, y1, z1);
-
- /* load into temporary storage for FB Hour Glass control */
- for(Index_t ii=0;ii<8;++ii){
- Index_t jj=8*i+ii;
-
- dvdx[jj] = pfx[ii];
- dvdy[jj] = pfy[ii];
- dvdz[jj] = pfz[ii];
- x8n[jj] = x1[ii];
- y8n[jj] = y1[ii];
- z8n[jj] = z1[ii];
- }
-
- determ[i] = domain.volo(i) * domain.v(i);
-
- /* Do a check for negative volumes */
- if ( domain.v(i) <= Real_t(0.0) ) {
-#if USE_MPI
- MPI_Abort(MPI_COMM_WORLD, VolumeError) ;
-#else
- exit(VolumeError);
-#endif
- }
- }
-
- if ( hgcoef > Real_t(0.) ) {
- CalcFBHourglassForceForElems( domain,
- determ, x8n, y8n, z8n, dvdx, dvdy, dvdz,
- hgcoef, numElem, domain.numNode()) ;
- }
-
- Release(&z8n) ;
- Release(&y8n) ;
- Release(&x8n) ;
- Release(&dvdz) ;
- Release(&dvdy) ;
- Release(&dvdx) ;
-
- return ;
-}
-static inline
-void CalcVolumeForceForElems(Domain& domain)
-{
- Index_t numElem = domain.numElem() ;
- if (numElem != 0) {
- Real_t hgcoef = domain.hgcoef() ;
- Real_t *sigxx = Allocate<Real_t>(numElem) ;
- Real_t *sigyy = Allocate<Real_t>(numElem) ;
- Real_t *sigzz = Allocate<Real_t>(numElem) ;
- Real_t *determ = Allocate<Real_t>(numElem) ;
-
- /* Sum contributions to total stress tensor */
- InitStressTermsForElems(domain, sigxx, sigyy, sigzz, numElem);
-
- // call elemlib stress integration loop to produce nodal forces from
- // material stresses.
- IntegrateStressForElems( domain,
- sigxx, sigyy, sigzz, determ, numElem,
- domain.numNode()) ;
-
- // check for negative element volume
-#pragma omp parallel for firstprivate(numElem)
- for ( Index_t k=0 ; k<numElem ; ++k ) {
- if (determ[k] <= Real_t(0.0)) {
-#if USE_MPI
- MPI_Abort(MPI_COMM_WORLD, VolumeError) ;
-#else
- exit(VolumeError);
-#endif
- }
- }
-
- CalcHourglassControlForElems(domain, determ, hgcoef) ;
-
- Release(&determ) ;
- Release(&sigzz) ;
- Release(&sigyy) ;
- Release(&sigxx) ;
- }
-}
-static inline void CalcForceForNodes(Domain& domain)
-{
- Index_t numNode = domain.numNode() ;
-
-#if USE_MPI
- CommRecv(domain, MSG_COMM_SBN, 3,
- domain.sizeX() + 1, domain.sizeY() + 1, domain.sizeZ() + 1,
- true, false) ;
-#endif
-
-#pragma omp parallel for firstprivate(numNode)
- for (Index_t i=0; i<numNode; ++i) {
- domain.fx(i) = Real_t(0.0) ;
- domain.fy(i) = Real_t(0.0) ;
- domain.fz(i) = Real_t(0.0) ;
- }
-
- /* Calcforce calls partial, force, hourq */
- CalcVolumeForceForElems(domain) ;
-
-#if USE_MPI
- Domain_member fieldData[3] ;
- fieldData[0] = &Domain::fx ;
- fieldData[1] = &Domain::fy ;
- fieldData[2] = &Domain::fz ;
-
- CommSend(domain, MSG_COMM_SBN, 3, fieldData,
- domain.sizeX() + 1, domain.sizeY() + 1, domain.sizeZ() + 1,
- true, false) ;
- CommSBN(domain, 3, fieldData) ;
-#endif
-}
-static inline
-void CalcAccelerationForNodes(Domain &domain, Index_t numNode)
-{
-
-#pragma omp parallel for firstprivate(numNode)
- for (Index_t i = 0; i < numNode; ++i) {
- domain.xdd(i) = domain.fx(i) / domain.nodalMass(i);
- domain.ydd(i) = domain.fy(i) / domain.nodalMass(i);
- domain.zdd(i) = domain.fz(i) / domain.nodalMass(i);
- }
-}
-static inline
-void ApplyAccelerationBoundaryConditionsForNodes(Domain& domain)
-{
- Index_t size = domain.sizeX();
- Index_t numNodeBC = (size+1)*(size+1) ;
-
-#pragma omp parallel
- {
- if (!domain.symmXempty() != 0) {
-#pragma omp for nowait firstprivate(numNodeBC)
- for(Index_t i=0 ; i<numNodeBC ; ++i)
- domain.xdd(domain.symmX(i)) = Real_t(0.0) ;
- }
-
- if (!domain.symmYempty() != 0) {
-#pragma omp for nowait firstprivate(numNodeBC)
- for(Index_t i=0 ; i<numNodeBC ; ++i)
- domain.ydd(domain.symmY(i)) = Real_t(0.0) ;
- }
-
- if (!domain.symmZempty() != 0) {
-#pragma omp for nowait firstprivate(numNodeBC)
- for(Index_t i=0 ; i<numNodeBC ; ++i)
- domain.zdd(domain.symmZ(i)) = Real_t(0.0) ;
- }
- }
-}
-static inline
-void CalcVelocityForNodes(Domain &domain, const Real_t dt, const Real_t u_cut,
- Index_t numNode)
-{
-
-#pragma omp parallel for firstprivate(numNode)
- for ( Index_t i = 0 ; i < numNode ; ++i )
- {
- Real_t xdtmp, ydtmp, zdtmp ;
-
- xdtmp = domain.xd(i) + domain.xdd(i) * dt ;
- if( FABS(xdtmp) < u_cut ) xdtmp = Real_t(0.0);
- domain.xd(i) = xdtmp ;
-
- ydtmp = domain.yd(i) + domain.ydd(i) * dt ;
- if( FABS(ydtmp) < u_cut ) ydtmp = Real_t(0.0);
- domain.yd(i) = ydtmp ;
-
- zdtmp = domain.zd(i) + domain.zdd(i) * dt ;
- if( FABS(zdtmp) < u_cut ) zdtmp = Real_t(0.0);
- domain.zd(i) = zdtmp ;
- }
-}
-static inline
-void CalcPositionForNodes(Domain &domain, const Real_t dt, Index_t numNode)
-{
-#pragma omp parallel for firstprivate(numNode)
- for ( Index_t i = 0 ; i < numNode ; ++i )
- {
- domain.x(i) += domain.xd(i) * dt ;
- domain.y(i) += domain.yd(i) * dt ;
- domain.z(i) += domain.zd(i) * dt ;
- }
-}
-static inline
-void LagrangeNodal(Domain& domain)
-{
-#ifdef SEDOV_SYNC_POS_VEL_EARLY
- Domain_member fieldData[6] ;
-#endif
-
- const Real_t delt = domain.deltatime() ;
- Real_t u_cut = domain.u_cut() ;
-
- /* time of boundary condition evaluation is beginning of step for force and
- * acceleration boundary conditions. */
- CalcForceForNodes(domain);
-
-#if USE_MPI
-#ifdef SEDOV_SYNC_POS_VEL_EARLY
- CommRecv(domain, MSG_SYNC_POS_VEL, 6,
- domain.sizeX() + 1, domain.sizeY() + 1, domain.sizeZ() + 1,
- false, false) ;
-#endif
-#endif
-
- CalcAccelerationForNodes(domain, domain.numNode());
-
- ApplyAccelerationBoundaryConditionsForNodes(domain);
-
- CalcVelocityForNodes( domain, delt, u_cut, domain.numNode()) ;
-
- CalcPositionForNodes( domain, delt, domain.numNode() );
-#if USE_MPI
-#ifdef SEDOV_SYNC_POS_VEL_EARLY
- fieldData[0] = &Domain::x ;
- fieldData[1] = &Domain::y ;
- fieldData[2] = &Domain::z ;
- fieldData[3] = &Domain::xd ;
- fieldData[4] = &Domain::yd ;
- fieldData[5] = &Domain::zd ;
-
- CommSend(domain, MSG_SYNC_POS_VEL, 6, fieldData,
- domain.sizeX() + 1, domain.sizeY() + 1, domain.sizeZ() + 1,
- false, false) ;
- CommSyncPosVel(domain) ;
-#endif
-#endif
-
- return;
-}
-static inline
-Real_t CalcElemVolume( const Real_t x0, const Real_t x1,
- const Real_t x2, const Real_t x3,
- const Real_t x4, const Real_t x5,
- const Real_t x6, const Real_t x7,
- const Real_t y0, const Real_t y1,
- const Real_t y2, const Real_t y3,
- const Real_t y4, const Real_t y5,
- const Real_t y6, const Real_t y7,
- const Real_t z0, const Real_t z1,
- const Real_t z2, const Real_t z3,
- const Real_t z4, const Real_t z5,
- const Real_t z6, const Real_t z7 )
-{
- Real_t twelveth = Real_t(1.0)/Real_t(12.0);
-
- Real_t dx61 = x6 - x1;
- Real_t dy61 = y6 - y1;
- Real_t dz61 = z6 - z1;
-
- Real_t dx70 = x7 - x0;
- Real_t dy70 = y7 - y0;
- Real_t dz70 = z7 - z0;
-
- Real_t dx63 = x6 - x3;
- Real_t dy63 = y6 - y3;
- Real_t dz63 = z6 - z3;
-
- Real_t dx20 = x2 - x0;
- Real_t dy20 = y2 - y0;
- Real_t dz20 = z2 - z0;
-
- Real_t dx50 = x5 - x0;
- Real_t dy50 = y5 - y0;
- Real_t dz50 = z5 - z0;
-
- Real_t dx64 = x6 - x4;
- Real_t dy64 = y6 - y4;
- Real_t dz64 = z6 - z4;
-
- Real_t dx31 = x3 - x1;
- Real_t dy31 = y3 - y1;
- Real_t dz31 = z3 - z1;
-
- Real_t dx72 = x7 - x2;
- Real_t dy72 = y7 - y2;
- Real_t dz72 = z7 - z2;
-
- Real_t dx43 = x4 - x3;
- Real_t dy43 = y4 - y3;
- Real_t dz43 = z4 - z3;
-
- Real_t dx57 = x5 - x7;
- Real_t dy57 = y5 - y7;
- Real_t dz57 = z5 - z7;
-
- Real_t dx14 = x1 - x4;
- Real_t dy14 = y1 - y4;
- Real_t dz14 = z1 - z4;
-
- Real_t dx25 = x2 - x5;
- Real_t dy25 = y2 - y5;
- Real_t dz25 = z2 - z5;
-
-#define TRIPLE_PRODUCT(x1, y1, z1, x2, y2, z2, x3, y3, z3) \
- ((x1)*((y2)*(z3) - (z2)*(y3)) + (x2)*((z1)*(y3) - (y1)*(z3)) + (x3)*((y1)*(z2) - (z1)*(y2)))
-
- Real_t volume =
- TRIPLE_PRODUCT(dx31 + dx72, dx63, dx20,
- dy31 + dy72, dy63, dy20,
- dz31 + dz72, dz63, dz20) +
- TRIPLE_PRODUCT(dx43 + dx57, dx64, dx70,
- dy43 + dy57, dy64, dy70,
- dz43 + dz57, dz64, dz70) +
- TRIPLE_PRODUCT(dx14 + dx25, dx61, dx50,
- dy14 + dy25, dy61, dy50,
- dz14 + dz25, dz61, dz50);
-
-#undef TRIPLE_PRODUCT
-
- volume *= twelveth;
-
- return volume ;
-}
-Real_t CalcElemVolume( const Real_t x[8], const Real_t y[8], const Real_t z[8] )
-{
-return CalcElemVolume( x[0], x[1], x[2], x[3], x[4], x[5], x[6], x[7],
- y[0], y[1], y[2], y[3], y[4], y[5], y[6], y[7],
- z[0], z[1], z[2], z[3], z[4], z[5], z[6], z[7]);
-}
-static inline
-Real_t AreaFace( const Real_t x0, const Real_t x1,
- const Real_t x2, const Real_t x3,
- const Real_t y0, const Real_t y1,
- const Real_t y2, const Real_t y3,
- const Real_t z0, const Real_t z1,
- const Real_t z2, const Real_t z3)
-{
- Real_t fx = (x2 - x0) - (x3 - x1);
- Real_t fy = (y2 - y0) - (y3 - y1);
- Real_t fz = (z2 - z0) - (z3 - z1);
- Real_t gx = (x2 - x0) + (x3 - x1);
- Real_t gy = (y2 - y0) + (y3 - y1);
- Real_t gz = (z2 - z0) + (z3 - z1);
- Real_t area =
- (fx * fx + fy * fy + fz * fz) *
- (gx * gx + gy * gy + gz * gz) -
- (fx * gx + fy * gy + fz * gz) *
- (fx * gx + fy * gy + fz * gz);
- return area ;
-}
-static inline
-Real_t CalcElemCharacteristicLength( const Real_t x[8],
- const Real_t y[8],
- const Real_t z[8],
- const Real_t volume)
-{
- Real_t a, charLength = Real_t(0.0);
-
- a = AreaFace(x[0],x[1],x[2],x[3],
- y[0],y[1],y[2],y[3],
- z[0],z[1],z[2],z[3]) ;
- charLength = std::max(a,charLength) ;
-
- a = AreaFace(x[4],x[5],x[6],x[7],
- y[4],y[5],y[6],y[7],
- z[4],z[5],z[6],z[7]) ;
- charLength = std::max(a,charLength) ;
-
- a = AreaFace(x[0],x[1],x[5],x[4],
- y[0],y[1],y[5],y[4],
- z[0],z[1],z[5],z[4]) ;
- charLength = std::max(a,charLength) ;
-
- a = AreaFace(x[1],x[2],x[6],x[5],
- y[1],y[2],y[6],y[5],
- z[1],z[2],z[6],z[5]) ;
- charLength = std::max(a,charLength) ;
-
- a = AreaFace(x[2],x[3],x[7],x[6],
- y[2],y[3],y[7],y[6],
- z[2],z[3],z[7],z[6]) ;
- charLength = std::max(a,charLength) ;
-
- a = AreaFace(x[3],x[0],x[4],x[7],
- y[3],y[0],y[4],y[7],
- z[3],z[0],z[4],z[7]) ;
- charLength = std::max(a,charLength) ;
-
- charLength = Real_t(4.0) * volume / SQRT(charLength);
-
- return charLength;
-}
-static inline
-void CalcElemVelocityGradient( const Real_t* const xvel,
- const Real_t* const yvel,
- const Real_t* const zvel,
- const Real_t b[][8],
- const Real_t detJ,
- Real_t* const d )
-{
- const Real_t inv_detJ = Real_t(1.0) / detJ ;
- Real_t dyddx, dxddy, dzddx, dxddz, dzddy, dyddz;
- const Real_t* const pfx = b[0];
- const Real_t* const pfy = b[1];
- const Real_t* const pfz = b[2];
-
- d[0] = inv_detJ * ( pfx[0] * (xvel[0]-xvel[6])
- + pfx[1] * (xvel[1]-xvel[7])
- + pfx[2] * (xvel[2]-xvel[4])
- + pfx[3] * (xvel[3]-xvel[5]) );
-
- d[1] = inv_detJ * ( pfy[0] * (yvel[0]-yvel[6])
- + pfy[1] * (yvel[1]-yvel[7])
- + pfy[2] * (yvel[2]-yvel[4])
- + pfy[3] * (yvel[3]-yvel[5]) );
-
- d[2] = inv_detJ * ( pfz[0] * (zvel[0]-zvel[6])
- + pfz[1] * (zvel[1]-zvel[7])
- + pfz[2] * (zvel[2]-zvel[4])
- + pfz[3] * (zvel[3]-zvel[5]) );
-
- dyddx = inv_detJ * ( pfx[0] * (yvel[0]-yvel[6])
- + pfx[1] * (yvel[1]-yvel[7])
- + pfx[2] * (yvel[2]-yvel[4])
- + pfx[3] * (yvel[3]-yvel[5]) );
-
- dxddy = inv_detJ * ( pfy[0] * (xvel[0]-xvel[6])
- + pfy[1] * (xvel[1]-xvel[7])
- + pfy[2] * (xvel[2]-xvel[4])
- + pfy[3] * (xvel[3]-xvel[5]) );
-
- dzddx = inv_detJ * ( pfx[0] * (zvel[0]-zvel[6])
- + pfx[1] * (zvel[1]-zvel[7])
- + pfx[2] * (zvel[2]-zvel[4])
- + pfx[3] * (zvel[3]-zvel[5]) );
-
- dxddz = inv_detJ * ( pfz[0] * (xvel[0]-xvel[6])
- + pfz[1] * (xvel[1]-xvel[7])
- + pfz[2] * (xvel[2]-xvel[4])
- + pfz[3] * (xvel[3]-xvel[5]) );
-
- dzddy = inv_detJ * ( pfy[0] * (zvel[0]-zvel[6])
- + pfy[1] * (zvel[1]-zvel[7])
- + pfy[2] * (zvel[2]-zvel[4])
- + pfy[3] * (zvel[3]-zvel[5]) );
-
- dyddz = inv_detJ * ( pfz[0] * (yvel[0]-yvel[6])
- + pfz[1] * (yvel[1]-yvel[7])
- + pfz[2] * (yvel[2]-yvel[4])
- + pfz[3] * (yvel[3]-yvel[5]) );
- d[5] = Real_t( .5) * ( dxddy + dyddx );
- d[4] = Real_t( .5) * ( dxddz + dzddx );
- d[3] = Real_t( .5) * ( dzddy + dyddz );
-}
-void CalcKinematicsForElems( Domain &domain,
- Real_t deltaTime, Index_t numElem )
-{
-
- // loop over all elements
-#pragma omp parallel for firstprivate(numElem, deltaTime)
- for( Index_t k=0 ; k<numElem ; ++k )
- {
- Real_t B[3][8] ; /** shape function derivatives */
- Real_t D[6] ;
- Real_t x_local[8] ;
- Real_t y_local[8] ;
- Real_t z_local[8] ;
- Real_t xd_local[8] ;
- Real_t yd_local[8] ;
- Real_t zd_local[8] ;
- Real_t detJ = Real_t(0.0) ;
-
- Real_t volume ;
- Real_t relativeVolume ;
- const Index_t* const elemToNode = domain.nodelist(k) ;
-
- // get nodal coordinates from global arrays and copy into local arrays.
- CollectDomainNodesToElemNodes(domain, elemToNode, x_local, y_local, z_local);
-
- // volume calculations
- volume = CalcElemVolume(x_local, y_local, z_local );
- relativeVolume = volume / domain.volo(k) ;
- domain.vnew(k) = relativeVolume ;
- domain.delv(k) = relativeVolume - domain.v(k) ;
-
- // set characteristic length
- domain.arealg(k) = CalcElemCharacteristicLength(x_local, y_local, z_local,
- volume);
-
- // get nodal velocities from global array and copy into local arrays.
- for( Index_t lnode=0 ; lnode<8 ; ++lnode )
- {
- Index_t gnode = elemToNode[lnode];
- xd_local[lnode] = domain.xd(gnode);
- yd_local[lnode] = domain.yd(gnode);
- zd_local[lnode] = domain.zd(gnode);
- }
-
- Real_t dt2 = Real_t(0.5) * deltaTime;
- for ( Index_t j=0 ; j<8 ; ++j )
- {
- x_local[j] -= dt2 * xd_local[j];
- y_local[j] -= dt2 * yd_local[j];
- z_local[j] -= dt2 * zd_local[j];
- }
-
- CalcElemShapeFunctionDerivatives( x_local, y_local, z_local,
- B, &detJ );
-
- CalcElemVelocityGradient( xd_local, yd_local, zd_local,
- B, detJ, D );
-
- // put velocity gradient quantities into their global arrays.
- domain.dxx(k) = D[0];
- domain.dyy(k) = D[1];
- domain.dzz(k) = D[2];
- }
-}
-static inline
-void CalcLagrangeElements(Domain& domain)
-{
- Index_t numElem = domain.numElem() ;
- if (numElem > 0) {
- const Real_t deltatime = domain.deltatime() ;
-
- domain.AllocateStrains(numElem);
-
- CalcKinematicsForElems(domain, deltatime, numElem) ;
-
- // element loop to do some stuff not included in the elemlib function.
-#pragma omp parallel for firstprivate(numElem)
- for ( Index_t k=0 ; k<numElem ; ++k )
- {
- // calc strain rate and apply as constraint (only done in FB element)
- Real_t vdov = domain.dxx(k) + domain.dyy(k) + domain.dzz(k) ;
- Real_t vdovthird = vdov/Real_t(3.0) ;
-
- // make the rate of deformation tensor deviatoric
- domain.vdov(k) = vdov ;
- domain.dxx(k) -= vdovthird ;
- domain.dyy(k) -= vdovthird ;
- domain.dzz(k) -= vdovthird ;
-
- // See if any volumes are negative, and take appropriate action.
- if (domain.vnew(k) <= Real_t(0.0))
- {
-#if USE_MPI
- MPI_Abort(MPI_COMM_WORLD, VolumeError) ;
-#else
- exit(VolumeError);
-#endif
- }
- }
- domain.DeallocateStrains();
- }
-}
-static inline
-void CalcMonotonicQGradientsForElems(Domain& domain)
-{
- Index_t numElem = domain.numElem();
-
-#pragma omp parallel for firstprivate(numElem)
- for (Index_t i = 0 ; i < numElem ; ++i ) {
- const Real_t ptiny = Real_t(1.e-36) ;
- Real_t ax,ay,az ;
- Real_t dxv,dyv,dzv ;
-
- const Index_t *elemToNode = domain.nodelist(i);
- Index_t n0 = elemToNode[0] ;
- Index_t n1 = elemToNode[1] ;
- Index_t n2 = elemToNode[2] ;
- Index_t n3 = elemToNode[3] ;
- Index_t n4 = elemToNode[4] ;
- Index_t n5 = elemToNode[5] ;
- Index_t n6 = elemToNode[6] ;
- Index_t n7 = elemToNode[7] ;
-
- Real_t x0 = domain.x(n0) ;
- Real_t x1 = domain.x(n1) ;
- Real_t x2 = domain.x(n2) ;
- Real_t x3 = domain.x(n3) ;
- Real_t x4 = domain.x(n4) ;
- Real_t x5 = domain.x(n5) ;
- Real_t x6 = domain.x(n6) ;
- Real_t x7 = domain.x(n7) ;
-
- Real_t y0 = domain.y(n0) ;
- Real_t y1 = domain.y(n1) ;
- Real_t y2 = domain.y(n2) ;
- Real_t y3 = domain.y(n3) ;
- Real_t y4 = domain.y(n4) ;
- Real_t y5 = domain.y(n5) ;
- Real_t y6 = domain.y(n6) ;
- Real_t y7 = domain.y(n7) ;
-
- Real_t z0 = domain.z(n0) ;
- Real_t z1 = domain.z(n1) ;
- Real_t z2 = domain.z(n2) ;
- Real_t z3 = domain.z(n3) ;
- Real_t z4 = domain.z(n4) ;
- Real_t z5 = domain.z(n5) ;
- Real_t z6 = domain.z(n6) ;
- Real_t z7 = domain.z(n7) ;
-
- Real_t xv0 = domain.xd(n0) ;
- Real_t xv1 = domain.xd(n1) ;
- Real_t xv2 = domain.xd(n2) ;
- Real_t xv3 = domain.xd(n3) ;
- Real_t xv4 = domain.xd(n4) ;
- Real_t xv5 = domain.xd(n5) ;
- Real_t xv6 = domain.xd(n6) ;
- Real_t xv7 = domain.xd(n7) ;
-
- Real_t yv0 = domain.yd(n0) ;
- Real_t yv1 = domain.yd(n1) ;
- Real_t yv2 = domain.yd(n2) ;
- Real_t yv3 = domain.yd(n3) ;
- Real_t yv4 = domain.yd(n4) ;
- Real_t yv5 = domain.yd(n5) ;
- Real_t yv6 = domain.yd(n6) ;
- Real_t yv7 = domain.yd(n7) ;
-
- Real_t zv0 = domain.zd(n0) ;
- Real_t zv1 = domain.zd(n1) ;
- Real_t zv2 = domain.zd(n2) ;
- Real_t zv3 = domain.zd(n3) ;
- Real_t zv4 = domain.zd(n4) ;
- Real_t zv5 = domain.zd(n5) ;
- Real_t zv6 = domain.zd(n6) ;
- Real_t zv7 = domain.zd(n7) ;
-
- Real_t vol = domain.volo(i)*domain.vnew(i) ;
- Real_t norm = Real_t(1.0) / ( vol + ptiny ) ;
-
- Real_t dxj = Real_t(-0.25)*((x0+x1+x5+x4) - (x3+x2+x6+x7)) ;
- Real_t dyj = Real_t(-0.25)*((y0+y1+y5+y4) - (y3+y2+y6+y7)) ;
- Real_t dzj = Real_t(-0.25)*((z0+z1+z5+z4) - (z3+z2+z6+z7)) ;
-
- Real_t dxi = Real_t( 0.25)*((x1+x2+x6+x5) - (x0+x3+x7+x4)) ;
- Real_t dyi = Real_t( 0.25)*((y1+y2+y6+y5) - (y0+y3+y7+y4)) ;
- Real_t dzi = Real_t( 0.25)*((z1+z2+z6+z5) - (z0+z3+z7+z4)) ;
-
- Real_t dxk = Real_t( 0.25)*((x4+x5+x6+x7) - (x0+x1+x2+x3)) ;
- Real_t dyk = Real_t( 0.25)*((y4+y5+y6+y7) - (y0+y1+y2+y3)) ;
- Real_t dzk = Real_t( 0.25)*((z4+z5+z6+z7) - (z0+z1+z2+z3)) ;
-
- /* find delvk and delxk ( i cross j ) */
-
- ax = dyi*dzj - dzi*dyj ;
- ay = dzi*dxj - dxi*dzj ;
- az = dxi*dyj - dyi*dxj ;
-
- domain.delx_zeta(i) = vol / SQRT(ax*ax + ay*ay + az*az + ptiny) ;
-
- ax *= norm ;
- ay *= norm ;
- az *= norm ;
-
- dxv = Real_t(0.25)*((xv4+xv5+xv6+xv7) - (xv0+xv1+xv2+xv3)) ;
- dyv = Real_t(0.25)*((yv4+yv5+yv6+yv7) - (yv0+yv1+yv2+yv3)) ;
- dzv = Real_t(0.25)*((zv4+zv5+zv6+zv7) - (zv0+zv1+zv2+zv3)) ;
-
- domain.delv_zeta(i) = ax*dxv + ay*dyv + az*dzv ;
-
- /* find delxi and delvi ( j cross k ) */
-
- ax = dyj*dzk - dzj*dyk ;
- ay = dzj*dxk - dxj*dzk ;
- az = dxj*dyk - dyj*dxk ;
-
- domain.delx_xi(i) = vol / SQRT(ax*ax + ay*ay + az*az + ptiny) ;
-
- ax *= norm ;
- ay *= norm ;
- az *= norm ;
-
- dxv = Real_t(0.25)*((xv1+xv2+xv6+xv5) - (xv0+xv3+xv7+xv4)) ;
- dyv = Real_t(0.25)*((yv1+yv2+yv6+yv5) - (yv0+yv3+yv7+yv4)) ;
- dzv = Real_t(0.25)*((zv1+zv2+zv6+zv5) - (zv0+zv3+zv7+zv4)) ;
-
- domain.delv_xi(i) = ax*dxv + ay*dyv + az*dzv ;
-
- /* find delxj and delvj ( k cross i ) */
-
- ax = dyk*dzi - dzk*dyi ;
- ay = dzk*dxi - dxk*dzi ;
- az = dxk*dyi - dyk*dxi ;
-
- domain.delx_eta(i) = vol / SQRT(ax*ax + ay*ay + az*az + ptiny) ;
-
- ax *= norm ;
- ay *= norm ;
- az *= norm ;
-
- dxv = Real_t(-0.25)*((xv0+xv1+xv5+xv4) - (xv3+xv2+xv6+xv7)) ;
- dyv = Real_t(-0.25)*((yv0+yv1+yv5+yv4) - (yv3+yv2+yv6+yv7)) ;
- dzv = Real_t(-0.25)*((zv0+zv1+zv5+zv4) - (zv3+zv2+zv6+zv7)) ;
-
- domain.delv_eta(i) = ax*dxv + ay*dyv + az*dzv ;
- }
-}
-static inline
-void CalcMonotonicQRegionForElems(Domain &domain, Int_t r,
- Real_t ptiny)
-{
- Real_t monoq_limiter_mult = domain.monoq_limiter_mult();
- Real_t monoq_max_slope = domain.monoq_max_slope();
- Real_t qlc_monoq = domain.qlc_monoq();
- Real_t qqc_monoq = domain.qqc_monoq();
-
-#pragma omp parallel for firstprivate(qlc_monoq, qqc_monoq, monoq_limiter_mult, monoq_max_slope, ptiny)
- for ( Index_t i = 0 ; i < domain.regElemSize(r); ++i ) {
- Index_t ielem = domain.regElemlist(r,i);
- Real_t qlin, qquad ;
- Real_t phixi, phieta, phizeta ;
- Int_t bcMask = domain.elemBC(ielem) ;
- Real_t delvm = 0.0, delvp =0.0;
-
- /* phixi */
- Real_t norm = Real_t(1.) / (domain.delv_xi(ielem)+ ptiny ) ;
-
- switch (bcMask & XI_M) {
- case XI_M_COMM: /* needs comm data */
- case 0: delvm = domain.delv_xi(domain.lxim(ielem)); break ;
- case XI_M_SYMM: delvm = domain.delv_xi(ielem) ; break ;
- case XI_M_FREE: delvm = Real_t(0.0) ; break ;
- default: fprintf(stderr, "Error in switch at %s line %d\n",
- __FILE__, __LINE__);
- delvm = 0; /* ERROR - but quiets the compiler */
- break;
- }
- switch (bcMask & XI_P) {
- case XI_P_COMM: /* needs comm data */
- case 0: delvp = domain.delv_xi(domain.lxip(ielem)) ; break ;
- case XI_P_SYMM: delvp = domain.delv_xi(ielem) ; break ;
- case XI_P_FREE: delvp = Real_t(0.0) ; break ;
- default: fprintf(stderr, "Error in switch at %s line %d\n",
- __FILE__, __LINE__);
- delvp = 0; /* ERROR - but quiets the compiler */
- break;
- }
-
- delvm = delvm * norm ;
- delvp = delvp * norm ;
-
- phixi = Real_t(.5) * ( delvm + delvp ) ;
-
- delvm *= monoq_limiter_mult ;
- delvp *= monoq_limiter_mult ;
-
- if ( delvm < phixi ) phixi = delvm ;
- if ( delvp < phixi ) phixi = delvp ;
- if ( phixi < Real_t(0.)) phixi = Real_t(0.) ;
- if ( phixi > monoq_max_slope) phixi = monoq_max_slope;
-
-
- /* phieta */
- norm = Real_t(1.) / ( domain.delv_eta(ielem) + ptiny ) ;
-
- switch (bcMask & ETA_M) {
- case ETA_M_COMM: /* needs comm data */
- case 0: delvm = domain.delv_eta(domain.letam(ielem)) ; break ;
- case ETA_M_SYMM: delvm = domain.delv_eta(ielem) ; break ;
- case ETA_M_FREE: delvm = Real_t(0.0) ; break ;
- default: fprintf(stderr, "Error in switch at %s line %d\n",
- __FILE__, __LINE__);
- delvm = 0; /* ERROR - but quiets the compiler */
- break;
- }
- switch (bcMask & ETA_P) {
- case ETA_P_COMM: /* needs comm data */
- case 0: delvp = domain.delv_eta(domain.letap(ielem)) ; break ;
- case ETA_P_SYMM: delvp = domain.delv_eta(ielem) ; break ;
- case ETA_P_FREE: delvp = Real_t(0.0) ; break ;
- default: fprintf(stderr, "Error in switch at %s line %d\n",
- __FILE__, __LINE__);
- delvp = 0; /* ERROR - but quiets the compiler */
- break;
- }
-
- delvm = delvm * norm ;
- delvp = delvp * norm ;
-
- phieta = Real_t(.5) * ( delvm + delvp ) ;
-
- delvm *= monoq_limiter_mult ;
- delvp *= monoq_limiter_mult ;
-
- if ( delvm < phieta ) phieta = delvm ;
- if ( delvp < phieta ) phieta = delvp ;
- if ( phieta < Real_t(0.)) phieta = Real_t(0.) ;
- if ( phieta > monoq_max_slope) phieta = monoq_max_slope;
-
- /* phizeta */
- norm = Real_t(1.) / ( domain.delv_zeta(ielem) + ptiny ) ;
-
- switch (bcMask & ZETA_M) {
- case ZETA_M_COMM: /* needs comm data */
- case 0: delvm = domain.delv_zeta(domain.lzetam(ielem)) ; break ;
- case ZETA_M_SYMM: delvm = domain.delv_zeta(ielem) ; break ;
- case ZETA_M_FREE: delvm = Real_t(0.0) ; break ;
- default: fprintf(stderr, "Error in switch at %s line %d\n",
- __FILE__, __LINE__);
- delvm = 0; /* ERROR - but quiets the compiler */
- break;
- }
- switch (bcMask & ZETA_P) {
- case ZETA_P_COMM: /* needs comm data */
- case 0: delvp = domain.delv_zeta(domain.lzetap(ielem)) ; break ;
- case ZETA_P_SYMM: delvp = domain.delv_zeta(ielem) ; break ;
- case ZETA_P_FREE: delvp = Real_t(0.0) ; break ;
- default: fprintf(stderr, "Error in switch at %s line %d\n",
- __FILE__, __LINE__);
- delvp = 0; /* ERROR - but quiets the compiler */
- break;
- }
-
- delvm = delvm * norm ;
- delvp = delvp * norm ;
-
- phizeta = Real_t(.5) * ( delvm + delvp ) ;
-
- delvm *= monoq_limiter_mult ;
- delvp *= monoq_limiter_mult ;
-
- if ( delvm < phizeta ) phizeta = delvm ;
- if ( delvp < phizeta ) phizeta = delvp ;
- if ( phizeta < Real_t(0.)) phizeta = Real_t(0.);
- if ( phizeta > monoq_max_slope ) phizeta = monoq_max_slope;
-
- /* Remove length scale */
-
- if ( domain.vdov(ielem) > Real_t(0.) ) {
- qlin = Real_t(0.) ;
- qquad = Real_t(0.) ;
- }
- else {
- Real_t delvxxi = domain.delv_xi(ielem) * domain.delx_xi(ielem) ;
- Real_t delvxeta = domain.delv_eta(ielem) * domain.delx_eta(ielem) ;
- Real_t delvxzeta = domain.delv_zeta(ielem) * domain.delx_zeta(ielem) ;
-
- if ( delvxxi > Real_t(0.) ) delvxxi = Real_t(0.) ;
- if ( delvxeta > Real_t(0.) ) delvxeta = Real_t(0.) ;
- if ( delvxzeta > Real_t(0.) ) delvxzeta = Real_t(0.) ;
-
- Real_t rho = domain.elemMass(ielem) / (domain.volo(ielem) * domain.vnew(ielem)) ;
-
- qlin = -qlc_monoq * rho *
- ( delvxxi * (Real_t(1.) - phixi) +
- delvxeta * (Real_t(1.) - phieta) +
- delvxzeta * (Real_t(1.) - phizeta) ) ;
-
- qquad = qqc_monoq * rho *
- ( delvxxi*delvxxi * (Real_t(1.) - phixi*phixi) +
- delvxeta*delvxeta * (Real_t(1.) - phieta*phieta) +
- delvxzeta*delvxzeta * (Real_t(1.) - phizeta*phizeta) ) ;
- }
-
- domain.qq(ielem) = qquad ;
- domain.ql(ielem) = qlin ;
- }
-}
-static inline
-void CalcMonotonicQForElems(Domain& domain)
-{
- //
- // initialize parameters
- //
- const Real_t ptiny = Real_t(1.e-36) ;
-
- //
- // calculate the monotonic q for all regions
- //
- for (Index_t r=0 ; r<domain.numReg() ; ++r) {
- if (domain.regElemSize(r) > 0) {
- CalcMonotonicQRegionForElems(domain, r, ptiny) ;
- }
- }
-}
-static inline
-void CalcQForElems(Domain& domain)
-{
- //
- // MONOTONIC Q option
- //
-
- Index_t numElem = domain.numElem() ;
-
- if (numElem != 0) {
- Int_t allElem = numElem + /* local elem */
- 2*domain.sizeX()*domain.sizeY() + /* plane ghosts */
- 2*domain.sizeX()*domain.sizeZ() + /* row ghosts */
- 2*domain.sizeY()*domain.sizeZ() ; /* col ghosts */
-
- domain.AllocateGradients(numElem, allElem);
-
-#if USE_MPI
- CommRecv(domain, MSG_MONOQ, 3,
- domain.sizeX(), domain.sizeY(), domain.sizeZ(),
- true, true) ;
-#endif
-
- /* Calculate velocity gradients */
- CalcMonotonicQGradientsForElems(domain);
-
-#if USE_MPI
- Domain_member fieldData[3] ;
-
- /* Transfer veloctiy gradients in the first order elements */
- /* problem->commElements->Transfer(CommElements::monoQ) ; */
-
- fieldData[0] = &Domain::delv_xi ;
- fieldData[1] = &Domain::delv_eta ;
- fieldData[2] = &Domain::delv_zeta ;
-
- CommSend(domain, MSG_MONOQ, 3, fieldData,
- domain.sizeX(), domain.sizeY(), domain.sizeZ(),
- true, true) ;
-
- CommMonoQ(domain) ;
-#endif
-
- CalcMonotonicQForElems(domain);
-
- // Free up memory
- domain.DeallocateGradients();
-
- /* Don't allow excessive artificial viscosity */
- Index_t idx = -1;
- for (Index_t i=0; i<numElem; ++i) {
- if ( domain.q(i) > domain.qstop() ) {
- idx = i ;
- break ;
- }
- }
-
- if(idx >= 0) {
-#if USE_MPI
- MPI_Abort(MPI_COMM_WORLD, QStopError) ;
-#else
- exit(QStopError);
-#endif
- }
- }
-}
-static inline
-void CalcPressureForElems(Real_t* p_new, Real_t* bvc,
- Real_t* pbvc, Real_t* e_old,
- Real_t* compression, Real_t *vnewc,
- Real_t pmin,
- Real_t p_cut, Real_t eosvmax,
- Index_t length, Index_t *regElemList)
-{
-#pragma omp parallel for firstprivate(length)
- for (Index_t i = 0; i < length ; ++i) {
- Real_t c1s = Real_t(2.0)/Real_t(3.0) ;
- bvc[i] = c1s * (compression[i] + Real_t(1.));
- pbvc[i] = c1s;
- }
-
-#pragma omp parallel for firstprivate(length, pmin, p_cut, eosvmax)
- for (Index_t i = 0 ; i < length ; ++i){
- Index_t ielem = regElemList[i];
-
- p_new[i] = bvc[i] * e_old[i] ;
-
- if (FABS(p_new[i]) < p_cut )
- p_new[i] = Real_t(0.0) ;
-
- if ( vnewc[ielem] >= eosvmax ) /* impossible condition here? */
- p_new[i] = Real_t(0.0) ;
-
- if (p_new[i] < pmin)
- p_new[i] = pmin ;
- }
-}
-static inline
-void CalcEnergyForElems(Real_t* p_new, Real_t* e_new, Real_t* q_new,
- Real_t* bvc, Real_t* pbvc,
- Real_t* p_old, Real_t* e_old, Real_t* q_old,
- Real_t* compression, Real_t* compHalfStep,
- Real_t* vnewc, Real_t* work, Real_t* delvc, Real_t pmin,
- Real_t p_cut, Real_t e_cut, Real_t q_cut, Real_t emin,
- Real_t* qq_old, Real_t* ql_old,
- Real_t rho0,
- Real_t eosvmax,
- Index_t length, Index_t *regElemList)
-{
- Real_t *pHalfStep = Allocate<Real_t>(length) ;
-
-#pragma omp parallel for firstprivate(length, emin)
- for (Index_t i = 0 ; i < length ; ++i) {
- e_new[i] = e_old[i] - Real_t(0.5) * delvc[i] * (p_old[i] + q_old[i])
- + Real_t(0.5) * work[i];
-
- if (e_new[i] < emin ) {
- e_new[i] = emin ;
- }
- }
-
- CalcPressureForElems(pHalfStep, bvc, pbvc, e_new, compHalfStep, vnewc,
- pmin, p_cut, eosvmax, length, regElemList);
-
-#pragma omp parallel for firstprivate(length, rho0)
- for (Index_t i = 0 ; i < length ; ++i) {
- Real_t vhalf = Real_t(1.) / (Real_t(1.) + compHalfStep[i]) ;
-
- if ( delvc[i] > Real_t(0.) ) {
- q_new[i] /* = qq_old[i] = ql_old[i] */ = Real_t(0.) ;
- }
- else {
- Real_t ssc = ( pbvc[i] * e_new[i]
- + vhalf * vhalf * bvc[i] * pHalfStep[i] ) / rho0 ;
-
- if ( ssc <= Real_t(.1111111e-36) ) {
- ssc = Real_t(.3333333e-18) ;
- } else {
- ssc = SQRT(ssc) ;
- }
-
- q_new[i] = (ssc*ql_old[i] + qq_old[i]) ;
- }
-
- e_new[i] = e_new[i] + Real_t(0.5) * delvc[i]
- * ( Real_t(3.0)*(p_old[i] + q_old[i])
- - Real_t(4.0)*(pHalfStep[i] + q_new[i])) ;
- }
-
-#pragma omp parallel for firstprivate(length, emin, e_cut)
- for (Index_t i = 0 ; i < length ; ++i) {
-
- e_new[i] += Real_t(0.5) * work[i];
-
- if (FABS(e_new[i]) < e_cut) {
- e_new[i] = Real_t(0.) ;
- }
- if ( e_new[i] < emin ) {
- e_new[i] = emin ;
- }
- }
-
- CalcPressureForElems(p_new, bvc, pbvc, e_new, compression, vnewc,
- pmin, p_cut, eosvmax, length, regElemList);
-
-#pragma omp parallel for firstprivate(length, rho0, emin, e_cut)
- for (Index_t i = 0 ; i < length ; ++i){
- const Real_t sixth = Real_t(1.0) / Real_t(6.0) ;
- Index_t ielem = regElemList[i];
- Real_t q_tilde ;
-
- if (delvc[i] > Real_t(0.)) {
- q_tilde = Real_t(0.) ;
- }
- else {
- Real_t ssc = ( pbvc[i] * e_new[i]
- + vnewc[ielem] * vnewc[ielem] * bvc[i] * p_new[i] ) / rho0 ;
-
- if ( ssc <= Real_t(.1111111e-36) ) {
- ssc = Real_t(.3333333e-18) ;
- } else {
- ssc = SQRT(ssc) ;
- }
-
- q_tilde = (ssc*ql_old[i] + qq_old[i]) ;
- }
-
- e_new[i] = e_new[i] - ( Real_t(7.0)*(p_old[i] + q_old[i])
- - Real_t(8.0)*(pHalfStep[i] + q_new[i])
- + (p_new[i] + q_tilde)) * delvc[i]*sixth ;
-
- if (FABS(e_new[i]) < e_cut) {
- e_new[i] = Real_t(0.) ;
- }
- if ( e_new[i] < emin ) {
- e_new[i] = emin ;
- }
- }
-
- CalcPressureForElems(p_new, bvc, pbvc, e_new, compression, vnewc,
- pmin, p_cut, eosvmax, length, regElemList);
-
-#pragma omp parallel for firstprivate(length, rho0, q_cut)
- for (Index_t i = 0 ; i < length ; ++i){
- Index_t ielem = regElemList[i];
-
- if ( delvc[i] <= Real_t(0.) ) {
- Real_t ssc = ( pbvc[i] * e_new[i]
- + vnewc[ielem] * vnewc[ielem] * bvc[i] * p_new[i] ) / rho0 ;
-
- if ( ssc <= Real_t(.1111111e-36) ) {
- ssc = Real_t(.3333333e-18) ;
- } else {
- ssc = SQRT(ssc) ;
- }
-
- q_new[i] = (ssc*ql_old[i] + qq_old[i]) ;
-
- if (FABS(q_new[i]) < q_cut) q_new[i] = Real_t(0.) ;
- }
- }
-
- Release(&pHalfStep) ;
-
- return ;
-}
-static inline
-void CalcSoundSpeedForElems(Domain &domain,
- Real_t *vnewc, Real_t rho0, Real_t *enewc,
- Real_t *pnewc, Real_t *pbvc,
- Real_t *bvc, Real_t ss4o3,
- Index_t len, Index_t *regElemList)
-{
-#pragma omp parallel for firstprivate(rho0, ss4o3)
- for (Index_t i = 0; i < len ; ++i) {
- Index_t ielem = regElemList[i];
- Real_t ssTmp = (pbvc[i] * enewc[i] + vnewc[ielem] * vnewc[ielem] *
- bvc[i] * pnewc[i]) / rho0;
- if (ssTmp <= Real_t(.1111111e-36)) {
- ssTmp = Real_t(.3333333e-18);
- }
- else {
- ssTmp = SQRT(ssTmp);
- }
- domain.ss(ielem) = ssTmp ;
- }
-}
-static inline
-void EvalEOSForElems(Domain& domain, Real_t *vnewc,
- Int_t numElemReg, Index_t *regElemList, Int_t rep)
-{
- Real_t e_cut = domain.e_cut() ;
- Real_t p_cut = domain.p_cut() ;
- Real_t ss4o3 = domain.ss4o3() ;
- Real_t q_cut = domain.q_cut() ;
-
- Real_t eosvmax = domain.eosvmax() ;
- Real_t eosvmin = domain.eosvmin() ;
- Real_t pmin = domain.pmin() ;
- Real_t emin = domain.emin() ;
- Real_t rho0 = domain.refdens() ;
-
- // These temporaries will be of different size for
- // each call (due to different sized region element
- // lists)
- Real_t *e_old = Allocate<Real_t>(numElemReg) ;
- Real_t *delvc = Allocate<Real_t>(numElemReg) ;
- Real_t *p_old = Allocate<Real_t>(numElemReg) ;
- Real_t *q_old = Allocate<Real_t>(numElemReg) ;
- Real_t *compression = Allocate<Real_t>(numElemReg) ;
- Real_t *compHalfStep = Allocate<Real_t>(numElemReg) ;
- Real_t *qq_old = Allocate<Real_t>(numElemReg) ;
- Real_t *ql_old = Allocate<Real_t>(numElemReg) ;
- Real_t *work = Allocate<Real_t>(numElemReg) ;
- Real_t *p_new = Allocate<Real_t>(numElemReg) ;
- Real_t *e_new = Allocate<Real_t>(numElemReg) ;
- Real_t *q_new = Allocate<Real_t>(numElemReg) ;
- Real_t *bvc = Allocate<Real_t>(numElemReg) ;
- Real_t *pbvc = Allocate<Real_t>(numElemReg) ;
-
- //loop to add load imbalance based on region number
- for(Int_t j = 0; j < rep; j++) {
- /* compress data, minimal set */
-#pragma omp parallel
- {
-#pragma omp for nowait firstprivate(numElemReg)
- for (Index_t i=0; i<numElemReg; ++i) {
- Index_t ielem = regElemList[i];
- e_old[i] = domain.e(ielem) ;
- delvc[i] = domain.delv(ielem) ;
- p_old[i] = domain.p(ielem) ;
- q_old[i] = domain.q(ielem) ;
- qq_old[i] = domain.qq(ielem) ;
- ql_old[i] = domain.ql(ielem) ;
- }
-
-#pragma omp for firstprivate(numElemReg)
- for (Index_t i = 0; i < numElemReg ; ++i) {
- Index_t ielem = regElemList[i];
- Real_t vchalf ;
- compression[i] = Real_t(1.) / vnewc[ielem] - Real_t(1.);
- vchalf = vnewc[ielem] - delvc[i] * Real_t(.5);
- compHalfStep[i] = Real_t(1.) / vchalf - Real_t(1.);
- }
-
- /* Check for v > eosvmax or v < eosvmin */
- if ( eosvmin != Real_t(0.) ) {
-#pragma omp for nowait firstprivate(numElemReg, eosvmin)
- for(Index_t i=0 ; i<numElemReg ; ++i) {
- Index_t ielem = regElemList[i];
- if (vnewc[ielem] <= eosvmin) { /* impossible due to calling func? */
- compHalfStep[i] = compression[i] ;
- }
- }
- }
- if ( eosvmax != Real_t(0.) ) {
-#pragma omp for nowait firstprivate(numElemReg, eosvmax)
- for(Index_t i=0 ; i<numElemReg ; ++i) {
- Index_t ielem = regElemList[i];
- if (vnewc[ielem] >= eosvmax) { /* impossible due to calling func? */
- p_old[i] = Real_t(0.) ;
- compression[i] = Real_t(0.) ;
- compHalfStep[i] = Real_t(0.) ;
- }
- }
- }
-
-#pragma omp for nowait firstprivate(numElemReg)
- for (Index_t i = 0 ; i < numElemReg ; ++i) {
- work[i] = Real_t(0.) ;
- }
- }
- CalcEnergyForElems(p_new, e_new, q_new, bvc, pbvc,
- p_old, e_old, q_old, compression, compHalfStep,
- vnewc, work, delvc, pmin,
- p_cut, e_cut, q_cut, emin,
- qq_old, ql_old, rho0, eosvmax,
- numElemReg, regElemList);
- }
-
-#pragma omp parallel for firstprivate(numElemReg)
- for (Index_t i=0; i<numElemReg; ++i) {
- Index_t ielem = regElemList[i];
- domain.p(ielem) = p_new[i] ;
- domain.e(ielem) = e_new[i] ;
- domain.q(ielem) = q_new[i] ;
- }
-
- CalcSoundSpeedForElems(domain,
- vnewc, rho0, e_new, p_new,
- pbvc, bvc, ss4o3,
- numElemReg, regElemList) ;
-
- Release(&pbvc) ;
- Release(&bvc) ;
- Release(&q_new) ;
- Release(&e_new) ;
- Release(&p_new) ;
- Release(&work) ;
- Release(&ql_old) ;
- Release(&qq_old) ;
- Release(&compHalfStep) ;
- Release(&compression) ;
- Release(&q_old) ;
- Release(&p_old) ;
- Release(&delvc) ;
- Release(&e_old) ;
-}
-static inline
-void ApplyMaterialPropertiesForElems(Domain& domain)
-{
- Index_t numElem = domain.numElem() ;
-
- if (numElem != 0) {
- /* Expose all of the variables needed for material evaluation */
- Real_t eosvmin = domain.eosvmin() ;
- Real_t eosvmax = domain.eosvmax() ;
- Real_t *vnewc = Allocate<Real_t>(numElem) ;
-
-#pragma omp parallel
- {
-#pragma omp for firstprivate(numElem)
- for(Index_t i=0 ; i<numElem ; ++i) {
- vnewc[i] = domain.vnew(i) ;
- }
-
- // Bound the updated relative volumes with eosvmin/max
- if (eosvmin != Real_t(0.)) {
-#pragma omp for nowait firstprivate(numElem)
- for(Index_t i=0 ; i<numElem ; ++i) {
- if (vnewc[i] < eosvmin)
- vnewc[i] = eosvmin ;
- }
- }
-
- if (eosvmax != Real_t(0.)) {
-#pragma omp for nowait firstprivate(numElem)
- for(Index_t i=0 ; i<numElem ; ++i) {
- if (vnewc[i] > eosvmax)
- vnewc[i] = eosvmax ;
- }
- }
-
- // This check may not make perfect sense in LULESH, but
- // it's representative of something in the full code -
- // just leave it in, please
-#pragma omp for nowait firstprivate(numElem)
- for (Index_t i=0; i<numElem; ++i) {
- Real_t vc = domain.v(i) ;
- if (eosvmin != Real_t(0.)) {
- if (vc < eosvmin)
- vc = eosvmin ;
- }
- if (eosvmax != Real_t(0.)) {
- if (vc > eosvmax)
- vc = eosvmax ;
- }
- if (vc <= 0.) {
-#if USE_MPI
- MPI_Abort(MPI_COMM_WORLD, VolumeError) ;
-#else
- exit(VolumeError);
-#endif
- }
- }
- }
-
- for (Int_t r=0 ; r<domain.numReg() ; r++) {
- Index_t numElemReg = domain.regElemSize(r);
- Index_t *regElemList = domain.regElemlist(r);
- Int_t rep;
- //Determine load imbalance for this region
- //round down the number with lowest cost
- if(r < domain.numReg()/2)
- rep = 1;
- //you don't get an expensive region unless you at least have 5 regions
- else if(r < (domain.numReg() - (domain.numReg()+15)/20))
- rep = 1 + domain.cost();
- //very expensive regions
- else
- rep = 10 * (1+ domain.cost());
- EvalEOSForElems(domain, vnewc, numElemReg, regElemList, rep);
- }
-
- Release(&vnewc) ;
- }
-}
-static inline
-void UpdateVolumesForElems(Domain &domain,
- Real_t v_cut, Index_t length)
-{
- if (length != 0) {
-#pragma omp parallel for firstprivate(length, v_cut)
- for(Index_t i=0 ; i<length ; ++i) {
- Real_t tmpV = domain.vnew(i) ;
-
- if ( FABS(tmpV - Real_t(1.0)) < v_cut )
- tmpV = Real_t(1.0) ;
-
- domain.v(i) = tmpV ;
- }
- }
-
- return ;
-}
-static inline
-void LagrangeElements(Domain& domain, Index_t numElem)
-{
- CalcLagrangeElements(domain) ;
-
- /* Calculate Q. (Monotonic q option requires communication) */
- CalcQForElems(domain) ;
-
- ApplyMaterialPropertiesForElems(domain) ;
-
- UpdateVolumesForElems(domain,
- domain.v_cut(), numElem) ;
-}
-static inline
-void CalcCourantConstraintForElems(Domain &domain, Index_t length,
- Index_t *regElemlist,
- Real_t qqc, Real_t& dtcourant)
-{
-#if _OPENMP
- const Index_t threads = omp_get_max_threads();
- Index_t courant_elem_per_thread[threads];
- Real_t dtcourant_per_thread[threads];
-#else
- Index_t threads = 1;
- Index_t courant_elem_per_thread[1];
- Real_t dtcourant_per_thread[1];
-#endif
-
-#pragma omp parallel firstprivate(length, qqc)
- {
- Real_t qqc2 = Real_t(64.0) * qqc * qqc ;
- Real_t dtcourant_tmp = dtcourant;
- Index_t courant_elem = -1 ;
-
-#if _OPENMP
- Index_t thread_num = omp_get_thread_num();
-#else
- Index_t thread_num = 0;
-#endif
-
-#pragma omp for
- for (Index_t i = 0 ; i < length ; ++i) {
- Index_t indx = regElemlist[i] ;
- Real_t dtf = domain.ss(indx) * domain.ss(indx) ;
-
- if ( domain.vdov(indx) < Real_t(0.) ) {
- dtf = dtf
- + qqc2 * domain.arealg(indx) * domain.arealg(indx)
- * domain.vdov(indx) * domain.vdov(indx) ;
- }
-
- dtf = SQRT(dtf) ;
- dtf = domain.arealg(indx) / dtf ;
-
- if (domain.vdov(indx) != Real_t(0.)) {
- if ( dtf < dtcourant_tmp ) {
- dtcourant_tmp = dtf ;
- courant_elem = indx ;
- }
- }
- }
-
- dtcourant_per_thread[thread_num] = dtcourant_tmp ;
- courant_elem_per_thread[thread_num] = courant_elem ;
- }
-
- for (Index_t i = 1; i < threads; ++i) {
- if (dtcourant_per_thread[i] < dtcourant_per_thread[0] ) {
- dtcourant_per_thread[0] = dtcourant_per_thread[i];
- courant_elem_per_thread[0] = courant_elem_per_thread[i];
- }
- }
-
- if (courant_elem_per_thread[0] != -1) {
- dtcourant = dtcourant_per_thread[0] ;
- }
-
- return ;
-
-}
-static inline
-void CalcHydroConstraintForElems(Domain &domain, Index_t length,
- Index_t *regElemlist, Real_t dvovmax, Real_t& dthydro)
-{
-#if _OPENMP
- const Index_t threads = omp_get_max_threads();
- Index_t hydro_elem_per_thread[threads];
- Real_t dthydro_per_thread[threads];
-#else
- Index_t threads = 1;
- Index_t hydro_elem_per_thread[1];
- Real_t dthydro_per_thread[1];
-#endif
-
-#pragma omp parallel firstprivate(length, dvovmax)
- {
- Real_t dthydro_tmp = dthydro ;
- Index_t hydro_elem = -1 ;
-
-#if _OPENMP
- Index_t thread_num = omp_get_thread_num();
-#else
- Index_t thread_num = 0;
-#endif
-
-#pragma omp for
- for (Index_t i = 0 ; i < length ; ++i) {
- Index_t indx = regElemlist[i] ;
-
- if (domain.vdov(indx) != Real_t(0.)) {
- Real_t dtdvov = dvovmax / (FABS(domain.vdov(indx))+Real_t(1.e-20)) ;
-
- if ( dthydro_tmp > dtdvov ) {
- dthydro_tmp = dtdvov ;
- hydro_elem = indx ;
- }
- }
- }
-
- dthydro_per_thread[thread_num] = dthydro_tmp ;
- hydro_elem_per_thread[thread_num] = hydro_elem ;
- }
-
- for (Index_t i = 1; i < threads; ++i) {
- if(dthydro_per_thread[i] < dthydro_per_thread[0]) {
- dthydro_per_thread[0] = dthydro_per_thread[i];
- hydro_elem_per_thread[0] = hydro_elem_per_thread[i];
- }
- }
-
- if (hydro_elem_per_thread[0] != -1) {
- dthydro = dthydro_per_thread[0] ;
- }
-
- return ;
-}
-static inline
-void CalcTimeConstraintsForElems(Domain& domain) {
-
- // Initialize conditions to a very large value
- domain.dtcourant() = 1.0e+20;
- domain.dthydro() = 1.0e+20;
-
- for (Index_t r=0 ; r < domain.numReg() ; ++r) {
- /* evaluate time constraint */
- CalcCourantConstraintForElems(domain, domain.regElemSize(r),
- domain.regElemlist(r),
- domain.qqc(),
- domain.dtcourant()) ;
-
- /* check hydro constraint */
- CalcHydroConstraintForElems(domain, domain.regElemSize(r),
- domain.regElemlist(r),
- domain.dvovmax(),
- domain.dthydro()) ;
- }
-}
-static inline
-void LagrangeLeapFrog(Domain& domain)
-{
-#ifdef SEDOV_SYNC_POS_VEL_LATE
- Domain_member fieldData[6] ;
-#endif
-
- /* calculate nodal forces, accelerations, velocities, positions, with
- * applied boundary conditions and slide surface considerations */
- LagrangeNodal(domain);
-
-
-#ifdef SEDOV_SYNC_POS_VEL_LATE
-#endif
-
- /* calculate element quantities (i.e. velocity gradient & q), and update
- * material states */
- LagrangeElements(domain, domain.numElem());
-
-#if USE_MPI
-#ifdef SEDOV_SYNC_POS_VEL_LATE
- CommRecv(domain, MSG_SYNC_POS_VEL, 6,
- domain.sizeX() + 1, domain.sizeY() + 1, domain.sizeZ() + 1,
- false, false) ;
-
- fieldData[0] = &Domain::x ;
- fieldData[1] = &Domain::y ;
- fieldData[2] = &Domain::z ;
- fieldData[3] = &Domain::xd ;
- fieldData[4] = &Domain::yd ;
- fieldData[5] = &Domain::zd ;
-
- CommSend(domain, MSG_SYNC_POS_VEL, 6, fieldData,
- domain.sizeX() + 1, domain.sizeY() + 1, domain.sizeZ() + 1,
- false, false) ;
-#endif
-#endif
-
- CalcTimeConstraintsForElems(domain);
-
-#if USE_MPI
-#ifdef SEDOV_SYNC_POS_VEL_LATE
- CommSyncPosVel(domain) ;
-#endif
-#endif
-}
-int main(int argc, char *argv[])
-{
- Domain *locDom ;
- int numRanks ;
- int myRank ;
- struct cmdLineOpts opts;
-
-#if USE_MPI
- Domain_member fieldData ;
-
-#ifdef _OPENMP
- int thread_support;
-
- MPI_Init_thread(&argc, &argv, MPI_THREAD_FUNNELED, &thread_support);
- if (thread_support==MPI_THREAD_SINGLE)
- {
- fprintf(stderr,"The MPI implementation has no support for threading\n");
- MPI_Finalize();
- exit(1);
- }
-#else
- MPI_Init(&argc, &argv);
-#endif
-
- MPI_Comm_size(MPI_COMM_WORLD, &numRanks) ;
- MPI_Comm_rank(MPI_COMM_WORLD, &myRank) ;
-#else
- numRanks = 1;
- myRank = 0;
-#endif
-
- /* Set defaults that can be overridden by command line opts */
- opts.its = 9999999;
- opts.nx = 30;
- opts.numReg = 11;
- opts.numFiles = (int)(numRanks+10)/9;
- opts.showProg = 0;
- opts.quiet = 0;
- opts.viz = 0;
- opts.balance = 1;
- opts.cost = 1;
-
- ParseCommandLineOptions(argc, argv, myRank, &opts);
-
- if ((myRank == 0) && (opts.quiet == 0)) {
- std::cout << "Running problem size " << opts.nx << "^3 per domain until completion\n";
- std::cout << "Num processors: " << numRanks << "\n";
-#if _OPENMP
- std::cout << "Num threads: " << omp_get_max_threads() << "\n";
-#endif
- std::cout << "Total number of elements: " << ((Int8_t)numRanks*opts.nx*opts.nx*opts.nx) << " \n\n";
- std::cout << "To run other sizes, use -s <integer>.\n";
- std::cout << "To run a fixed number of iterations, use -i <integer>.\n";
- std::cout << "To run a more or less balanced region set, use -b <integer>.\n";
- std::cout << "To change the relative costs of regions, use -c <integer>.\n";
- std::cout << "To print out progress, use -p\n";
- std::cout << "To write an output file for VisIt, use -v\n";
- std::cout << "See help (-h) for more options\n\n";
- }
-
- // Set up the mesh and decompose. Assumes regular cubes for now
- Int_t col, row, plane, side;
- InitMeshDecomp(numRanks, myRank, &col, &row, &plane, &side);
-
- // Build the main data structure and initialize it
- locDom = new Domain(numRanks, col, row, plane, opts.nx,
- side, opts.numReg, opts.balance, opts.cost) ;
-
-
-#if USE_MPI
- fieldData = &Domain::nodalMass ;
-
- // Initial domain boundary communication
- CommRecv(*locDom, MSG_COMM_SBN, 1,
- locDom->sizeX() + 1, locDom->sizeY() + 1, locDom->sizeZ() + 1,
- true, false) ;
- CommSend(*locDom, MSG_COMM_SBN, 1, &fieldData,
- locDom->sizeX() + 1, locDom->sizeY() + 1, locDom->sizeZ() + 1,
- true, false) ;
- CommSBN(*locDom, 1, &fieldData) ;
-
- // End initialization
- MPI_Barrier(MPI_COMM_WORLD);
-#endif
-
- // BEGIN timestep to solution */
-#if USE_MPI
- double start = MPI_Wtime();
-#else
- timeval start;
- gettimeofday(&start, NULL) ;
-#endif
-//debug to see region sizes
-// for(Int_t i = 0; i < locDom->numReg(); i++)
-// std::cout << "region" << i + 1<< "size" << locDom->regElemSize(i) <<std::endl;
- while((locDom->time() < locDom->stoptime()) && (locDom->cycle() < opts.its)) {
-
- TimeIncrement(*locDom) ;
- LagrangeLeapFrog(*locDom) ;
-
- if ((opts.showProg != 0) && (opts.quiet == 0) && (myRank == 0)) {
- std::cout << "cycle = " << locDom->cycle() << ", "
- << std::scientific
- << "time = " << double(locDom->time()) << ", "
- << "dt=" << double(locDom->deltatime()) << "\n";
- std::cout.unsetf(std::ios_base::floatfield);
- }
- }
-
- // Use reduced max elapsed time
- double elapsed_time;
-#if USE_MPI
- elapsed_time = MPI_Wtime() - start;
-#else
- timeval end;
- gettimeofday(&end, NULL) ;
- elapsed_time = (double)(end.tv_sec - start.tv_sec) + ((double)(end.tv_usec - start.tv_usec))/1000000 ;
-#endif
- double elapsed_timeG;
-#if USE_MPI
- MPI_Reduce(&elapsed_time, &elapsed_timeG, 1, MPI_DOUBLE,
- MPI_MAX, 0, MPI_COMM_WORLD);
-#else
- elapsed_timeG = elapsed_time;
-#endif
-
- // Write out final viz file */
- if (opts.viz) {
- DumpToVisit(*locDom, opts.numFiles, myRank, numRanks) ;
- }
-
- if ((myRank == 0) && (opts.quiet == 0)) {
- VerifyAndWriteFinalOutput(elapsed_timeG, *locDom, opts.nx, numRanks);
- }
-
- delete locDom;
-
-#if USE_MPI
- MPI_Finalize() ;
-#endif
-
- return 0 ;
-}
-
diff --git a/test/4_Lulesh/merged.ipcg b/test/4_Lulesh/merged.ipcg
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