Remove separate folder for solver

This repo should now contain only the solver

.coveragerc

+[run]
+include =
+    */src/*
\ No newline at end of file

.gitlab-ci.yml

@@ -3,7 +3,7 @@ variables:
   DOCKER_TLS_CERTDIR: ""
   DOCKER_HOST: tcp://docker:2375
   DOCKER_DRIVER: overlay2
-  APP_DIRECTORY: fenicsR13
+  APP_DIRECTORY: .
   DOCS_DIRECTORY: ${APP_DIRECTORY}/docs
 services:
 - docker:dind # docker in docker

fenicsR13/docs/conf.py → docs/conf.py

@@ -61,14 +61,14 @@ html_theme = 'alabaster'
 # so a file named "default.css" will overwrite the builtin "default.css".
 html_static_path = ['_static']
 
-html_logo = "media/logo_large.png"
-html_favicon = "media/logo_large.png"
-latex_logo = "media/logo_large.png"
+html_logo = "../media/logo_large.png"
+html_favicon = "../media/logo_large.png"
+latex_logo = "../media/logo_large.png"
 
 html_theme_options = {
     'sidebar_collapse': False,
     'description': "Release v{}<br>Extended gas dynamics using FEniCS platform.".format(release),
-    "touch_icon": "../../../logo_large.png",
+    "touch_icon": "../media/logo_large.png",
     "fixed_sidebar": True,
     "note_bg": "#FFF59C",
     "show_relbars": False,

fenicsR13/docs/index.rst → docs/index.rst

-.. include:: ../../README.rst
+
+.. include:: ../README.rst
     :start-after: inclusion-marker
-.. include:: ../../TODO.rst
-.. include:: ../../CHANGELOG.rst
+.. include:: ../TODO.rst
+.. include:: ../CHANGELOG.rst
 
 Indices and Tables
 ------------------

docs/media

+../media/
\ No newline at end of file